Gene Sros_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3090 
Symbol 
ID8666377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3371168 
End bp3371899 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003338781 
Protein GI271964585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.385267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCCCG CTGATTTCTA CACAGGCATC GTCGCCGAGT TATATGGACC ACTGAAATCC 
GTCGCTCAAG ATCCAGAGCC CTACGCGGCC TTTGTACAAG AGGCCGGTTC CCCGGCTCTG
GAGCTGGGGT GCGGGGACGG CGATCCGTTG CTCGACCTGC GTCGGCGCGG CCTGGACGTC
GAGGGCGTTG ACGCCTCGGC GGACATGCTG GACCGGTGCC GTCGCCGGGC ATGGAAGCAA
GGCGTCGATG TCGACGTCTA CCACCAGCGC ATGGAGGCGC TCGATCTGCC ACGCCGCTAC
CGTGCGATCT TCCTCGCCGG ACCGACTTTC AACCTACTTC CCGACGACTC CACCGCTCTG
GCTGCCCTCC ATGGCATCCG CAACCACCTC GCCGTGGGCG GCACCGCCCT GGTGCCCCTG
TTTGTCCCAT CGCCCACACC TGCCGAACAG ATCGGCCGAG CGCGCACCGC TACGGCGGAC
GACGGTGCTG AGTTGCGTGT CTCGGTGCTG TCCGAGGAGC GTAGCGATTC CGCGCGGACA
CAGACGACGG TGTTGCGCTA CGAGCGATAC CGCGACGGCG AGAGCACCAT CGTGGACCGC
CCCTGGGTAC TGCACTGGTA CACCCGCTCA GGATTCGAGG GCCTTGCCGC AGCCGCCGGC
CTGATCGCGG TGTCGGTCCT GGAGACGCCA GGCGCCTCCG ACCTGCAATT CCAGCTGCAA
GCCGCCGATT GA
 
Protein sequence
MNPADFYTGI VAELYGPLKS VAQDPEPYAA FVQEAGSPAL ELGCGDGDPL LDLRRRGLDV 
EGVDASADML DRCRRRAWKQ GVDVDVYHQR MEALDLPRRY RAIFLAGPTF NLLPDDSTAL
AALHGIRNHL AVGGTALVPL FVPSPTPAEQ IGRARTATAD DGAELRVSVL SEERSDSART
QTTVLRYERY RDGESTIVDR PWVLHWYTRS GFEGLAAAAG LIAVSVLETP GASDLQFQLQ
AAD