Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3085 |
Symbol | |
ID | 8666372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3367082 |
End bp | 3367831 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
Protein accession | YP_003338777 |
Protein GI | 271964581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.140815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCCTGC TGAACCGGTT CGGGCTCGAC CGGCTCACCG GGGAGGTGGA CCGGCTCTGG GCCACCGCGT CCTCGCTGCT CGACGAGTCG GCGGTGCTGT TCGAGCCACC GGTGGCCACC TGTACCAAGA TCTGCTGCCT GGCGCTCAAC TACGTGGAGC ACGCCGAGGA GAGCGGGCTG GAGGTGCCGC CCTCGCCGGT GCTGTTCTTC AAGCCGCCGT CCTCGCTGAC CGGCCACAAC CGCCCGGTCG TGGCTCCGGC CCGGACGCGG CATCTGGAGC ACGAGGTGGA GCTGGCCGTC GTCATCGGGT CGGTGACCCG GGACCTGCCG GCCGAGCGCT GGCGGGAAGC CGTGGCCGGC TACACGGTGA TCAACGATAT GACGGCCCGC GACCTGCAGC TGGCGAACAT CGACCGCAAC GTGCCGTGGG ACCAGGCCAA GGGGTTCGAC ACCTTCGCCC CCGCCGGGCC GTATCTCGCC ACCGTGGACG AGGTGCCCGA TCCCCAGGCG CTCGAACTCC GCCTGGAGGT GGACGGCCAG GTGCGGCAGC GGGCGAACAC CAAGCAGATG GTGTTCGGGA TCCCCCAGCT GATCGCCGAC CTGTCGGACG GGATGACGCT GGAGCCCGGC GACCTCATCG CGACCGGCAC CATCGCCGGG ATCGCCCCCC TCCAGGAGGG CGACGTCATG CGGGCCACGG TGGCCGGCGT CGGAACACTG GTGAACAGGG TTACATTTAG GACCGCCTAA
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Protein sequence | MALLNRFGLD RLTGEVDRLW ATASSLLDES AVLFEPPVAT CTKICCLALN YVEHAEESGL EVPPSPVLFF KPPSSLTGHN RPVVAPARTR HLEHEVELAV VIGSVTRDLP AERWREAVAG YTVINDMTAR DLQLANIDRN VPWDQAKGFD TFAPAGPYLA TVDEVPDPQA LELRLEVDGQ VRQRANTKQM VFGIPQLIAD LSDGMTLEPG DLIATGTIAG IAPLQEGDVM RATVAGVGTL VNRVTFRTA
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