Gene Sros_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3085 
Symbol 
ID8666372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3367082 
End bp3367831 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID 
Product5-carboxymethyl-2-hydroxymuconateDelta- isomerase 
Protein accessionYP_003338777 
Protein GI271964581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.140815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTGC TGAACCGGTT CGGGCTCGAC CGGCTCACCG GGGAGGTGGA CCGGCTCTGG 
GCCACCGCGT CCTCGCTGCT CGACGAGTCG GCGGTGCTGT TCGAGCCACC GGTGGCCACC
TGTACCAAGA TCTGCTGCCT GGCGCTCAAC TACGTGGAGC ACGCCGAGGA GAGCGGGCTG
GAGGTGCCGC CCTCGCCGGT GCTGTTCTTC AAGCCGCCGT CCTCGCTGAC CGGCCACAAC
CGCCCGGTCG TGGCTCCGGC CCGGACGCGG CATCTGGAGC ACGAGGTGGA GCTGGCCGTC
GTCATCGGGT CGGTGACCCG GGACCTGCCG GCCGAGCGCT GGCGGGAAGC CGTGGCCGGC
TACACGGTGA TCAACGATAT GACGGCCCGC GACCTGCAGC TGGCGAACAT CGACCGCAAC
GTGCCGTGGG ACCAGGCCAA GGGGTTCGAC ACCTTCGCCC CCGCCGGGCC GTATCTCGCC
ACCGTGGACG AGGTGCCCGA TCCCCAGGCG CTCGAACTCC GCCTGGAGGT GGACGGCCAG
GTGCGGCAGC GGGCGAACAC CAAGCAGATG GTGTTCGGGA TCCCCCAGCT GATCGCCGAC
CTGTCGGACG GGATGACGCT GGAGCCCGGC GACCTCATCG CGACCGGCAC CATCGCCGGG
ATCGCCCCCC TCCAGGAGGG CGACGTCATG CGGGCCACGG TGGCCGGCGT CGGAACACTG
GTGAACAGGG TTACATTTAG GACCGCCTAA
 
Protein sequence
MALLNRFGLD RLTGEVDRLW ATASSLLDES AVLFEPPVAT CTKICCLALN YVEHAEESGL 
EVPPSPVLFF KPPSSLTGHN RPVVAPARTR HLEHEVELAV VIGSVTRDLP AERWREAVAG
YTVINDMTAR DLQLANIDRN VPWDQAKGFD TFAPAGPYLA TVDEVPDPQA LELRLEVDGQ
VRQRANTKQM VFGIPQLIAD LSDGMTLEPG DLIATGTIAG IAPLQEGDVM RATVAGVGTL
VNRVTFRTA