Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3075 |
Symbol | |
ID | 8666362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3355418 |
End bp | 3356713 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | sugar ABC transporter periplasmic sugar-binding protein |
Protein accession | YP_003338768 |
Protein GI | 271964572 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.111769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCAC CCAGGACGGC GTTAGCGGCA GGGCTGCTGG CGCTGGCGGT TCTCACCACC GGGTGCGTGG CGGGCACCTC CGCCGGCGCC CCCTCCGCCG CGGCCGACCA GCCGTTCGAG GGTGAGGTCG AATTCTGGAC GATCAACCTG AAGAAGAACT TCAACGACTA TGTCACCGGG CTGATCACCC AGTACCAGAA GGAACACCCC AAGGTCACCG TCAAGTGGGT GGACGTGCCC GGCCAGGACA GCGCGACCAA GCTGCTCGCG GCCATGGCCA GCGGTGACGT GCCCGACGCG GTCAACCTGG GCTCTCCCGA CATCGGCAGG TTCATCCCGT CGCTGGCGCC GATGGACGAC TACTTCAAGC CGGAGGACCT CGCCGACTTC CAGCCGAACC TGGTGGAGCC GCTGCGCCAG GACGGCAAGC TCTACGGGGT GCCCTGGTAC AACGGCGGCG CCCCGGTGGC GATGTACCGC AAGTCGGTCG TGTCCAAGGC CGGCTTCGAC GAGAAGGCGC CGCCGAAGAC CTACGACGAG GCACTGGACC TGGCGGCCAA GGTCTACGAC GAGACCAAGG TCTACGGCAT CAACGAGATC CCCGGGCCGT CCGTCGTCTC CGTGCTGCGC TACTACGGGG TCACGCTGCT GTCGGAGGAC AGGAAGAAGG CGGCGTTCAA CACCCCCGAG GTCGCCGCGA TCATCGAGAG GTTCAAGAAG AGCTACGACG AGCACGGCAT CGCGCCGGGC TCCGTCTCCA AGGACGTCCG CGCCCTTCCG CAGAGCCTCG ACAACGGCCA GGTCGCCTTC ACGGCCAGCG CCAACGGCTC GACCCTGGTC AACATCCAGA AGAACGCCCC CGACATCTAC AAGGACCTCG TCGTCACCGA GCCCGTCCGG ACGGCCGGCG GCGGCTACCT GCTCAACGCC CAGCAGACGT TCACGATCCC CAAGGCCTCC AAGCACAAGA AGGCGGCGGC CGAGTTCATC AAGTTCTTCA CCAACGGCGC CAACCAGCTC GCCTTCTGCA AGATCGTGCC GATCTACCCG TCGACGATCT CCTCGACGAA GGACGCCTTC TTCACCGGCA CCGGCGGCAC CGAGCCGATG GACGTCGCCC GCCAGGTGAT CGTCAAGGGG CTGCCGAAAC TGGAGTACAC ACCGATGGGC ACGGCCAAGG ACACCGAGCT CGCCGAGTCC CTGGCGGAGG AGATCCGCGC CGTGTTCCAG GGACAGAAGA GCGTGAAGGA CGCGCTCGAC ACCGCAGAGA AGAATTGGAA TGACGCTCTT GTCTAA
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Protein sequence | MTPPRTALAA GLLALAVLTT GCVAGTSAGA PSAAADQPFE GEVEFWTINL KKNFNDYVTG LITQYQKEHP KVTVKWVDVP GQDSATKLLA AMASGDVPDA VNLGSPDIGR FIPSLAPMDD YFKPEDLADF QPNLVEPLRQ DGKLYGVPWY NGGAPVAMYR KSVVSKAGFD EKAPPKTYDE ALDLAAKVYD ETKVYGINEI PGPSVVSVLR YYGVTLLSED RKKAAFNTPE VAAIIERFKK SYDEHGIAPG SVSKDVRALP QSLDNGQVAF TASANGSTLV NIQKNAPDIY KDLVVTEPVR TAGGGYLLNA QQTFTIPKAS KHKKAAAEFI KFFTNGANQL AFCKIVPIYP STISSTKDAF FTGTGGTEPM DVARQVIVKG LPKLEYTPMG TAKDTELAES LAEEIRAVFQ GQKSVKDALD TAEKNWNDAL V
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