| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3052 |
|---|
| Symbol | |
|---|
| ID | 8666339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3329975 |
|---|
| End bp | 3331729 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Thiamine pyrophosphate-requiring protein-like protein |
|---|
| Protein accession | YP_003338747 |
|---|
| Protein GI | 271964551 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.912898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.512138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGTCG CCGAGGCCGT GGGCCGCGTC CTCGCCTCGC TCGGTGTGGA CACCGCCTTC
GGCGTGGTCG GCAGCGGCAA CTTCCACGTG ACCAACGCGC TGGTCGAGCA CGGCGTGCGG
TTCGTCGCCG CACGCCACGA GGGCGGCGCG GCGACCATGG CCGACGCCTA CGCGCGCACC
GGCGGCCGGG TCGGCGTGCT CAGCGTCCAC CAGGGGCCGG GGCTCACCAA CGCGATGACC
GGCATCACCG AGGCCGCCAA GAGCCGCACG CCGCTCATCG TGCTGGCCGC CGAGGTGACC
GAGCCCCGGT CCAACTTCTT CGTCGACCAG GCCGCCCTCG CCACGGCGGT CGGCGCCGTC
CCCCTGCGGA TCACCTCCGC CGGGACCGCC GTCGCGGAGA CGCTCCAGGC GTTCCACCTG
GCCCGCGACG GGCGGCGCAC GGTCCTGCTG AACCTCCCGC TGGAGGTCCA GGGCCGGCCC
GTCCCCACCC CGCCCGCTCC CGCCTCTCTC GCCTCCGTCC CGGAGCCCTC CGAGCCGGAG
GCGAGGGAGG TCGCGCGGCT GGCGGAGCTT CTCGGGGCCG CGCGGCGGCC GGTGTTCGTG
GCGGGGCGGG GAGCACGCGC GGCCAGGCTG GAGCTGGAGG AGCTCGCTGA GCGGATCGGG
GCGCTGCTCG CCACCTCCGC CGTGGCCAAG GGACTCTTCC GGGGCAGCCC GTGGGATCTG
GACGTGAGCG GTGGCTTCGC CTCGCCTCTC ACCGCCGAAC TCGTCCGCGG CGCCGACGTG
ATCGTCGGCT GGGGCTGCGC GCTCAACATG TGGACCATGC GCCAGGGCAC GCTCATCGGC
CCGGAGGCCA AGGTCGCCCA GGTCGACCTG GACGCCGACG CCCTCGGCGC CCACCGGCCG
ATCGATCTCG GCGTGGTCGG CGACGTCGCC CTCACCGCGC GGTCCGTCAC CACCCTGCTC
GCCGGGGGCG GGGACGACCT CCGCCAGGCG TCCGCCGCGC GGGACGGGGC AGGCCGGGAG
GCTTCTGCCG TACCGGGCGA CGGGCCCGGG GCGCCGGACG CGCCGGGTGG GAGCGGTCCC
GGCGCGCCGG GTGGCATCGG GTACCGGTCG CGGGTGTTGG CCGAGCGGAT CGCCCGCGAG
AACCGCTGGC GGGACGTGCC CTATGCCGAC GAGGGGGGCG AGGGCCGCAT CGACCCCCGC
ACCCTCACGA TCGAGCTGGA CGACCTCCTC CCCGCCGAAC GCGTCGTCTC CGTCGATTCC
GGAAATTTCA TGGGATATCC GTCGATGTTC CTCGACGTCC CAGATGAACG CGGTTTCTGC
TTCACCCAGG CATTTCAGTC CATCGGCCTC GGCCTGGCCA CCGCGATCGG CGCCGCCCTG
GCCCAACCGG CCCGACTCGC GGTGGCGGCG CTGGGCGACG GGGGCGCGCT GATGGGCGTC
GCCGAGTTGG AGACGGTCGT ACGGCTCGGC CTTCCGATGG TGATCGTGGT CTATGACGAC
GAGGGCTACG GGGCCGAGGT CCACCACTTC GGCCCGGACG GGCACAGCCT GGACACCGTC
ACCTTCCCGC CCGTCGACAT CGCCGCCATA GCCCGGGGTT TCGGCTGCGA GGCGGTGACC
GTACGGGGCC GGGAGGACCT CGCCGCGGTG GCCGGATGGC TGGACGGGCC GCGGCACCGG
CCGCTGCTGG TCCACGCCAA GGTCAGTGGC GCGCGGGGGT CGTGGTGGCT GGAGGAGGCC
TTCCGCGGGC ATTGA
|
|---|
| Protein sequence | MNVAEAVGRV LASLGVDTAF GVVGSGNFHV TNALVEHGVR FVAARHEGGA ATMADAYART
GGRVGVLSVH QGPGLTNAMT GITEAAKSRT PLIVLAAEVT EPRSNFFVDQ AALATAVGAV
PLRITSAGTA VAETLQAFHL ARDGRRTVLL NLPLEVQGRP VPTPPAPASL ASVPEPSEPE
AREVARLAEL LGAARRPVFV AGRGARAARL ELEELAERIG ALLATSAVAK GLFRGSPWDL
DVSGGFASPL TAELVRGADV IVGWGCALNM WTMRQGTLIG PEAKVAQVDL DADALGAHRP
IDLGVVGDVA LTARSVTTLL AGGGDDLRQA SAARDGAGRE ASAVPGDGPG APDAPGGSGP
GAPGGIGYRS RVLAERIARE NRWRDVPYAD EGGEGRIDPR TLTIELDDLL PAERVVSVDS
GNFMGYPSMF LDVPDERGFC FTQAFQSIGL GLATAIGAAL AQPARLAVAA LGDGGALMGV
AELETVVRLG LPMVIVVYDD EGYGAEVHHF GPDGHSLDTV TFPPVDIAAI ARGFGCEAVT
VRGREDLAAV AGWLDGPRHR PLLVHAKVSG ARGSWWLEEA FRGH
|
|---|
| |