Gene Sros_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3042 
Symbol 
ID8666329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3316435 
End bp3316860 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transcriptional regulator, AraC family, isolated domain protein 
Protein accessionYP_003338737 
Protein GI271964541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.319564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTTGG AGGACCTCGT CCGGCTGCGC CGGGCCCGCG ACCTGATGGA CCGCGACTAC 
TCGGAGCCGC TCGACGTTCC GGCGCTGGCG CGGGTCGCCC TCATGTCGCC GGGCCATTTC
TCCCGCAGCT TCCGCGCCGC CTTCGGGGAG ACGCCGTACA GCTACCTGAT GACGCGCCGG
ATCGAGCGGG CCAAGGCGCT GCTGCGGCGG GGTGACCTGA CGGTGACGGA GGTCTGCTTC
GCGGTCGGCT GTACATCGCT GGGATCGTTC AGCTCGCGGT TCACCGAGCT GGTCGGCGAG
AGCCCGAGCT CATACCGGGC CCGCAGCCAT GACGACGGCG CCGCCATCCC GGCCTGCGTC
GCCAAGATCT ACACGCGACC GGTCAGGAAT GGAGAAGCGA GACCTGATTC CCCGCCCCTA
GTGTGA
 
Protein sequence
MTLEDLVRLR RARDLMDRDY SEPLDVPALA RVALMSPGHF SRSFRAAFGE TPYSYLMTRR 
IERAKALLRR GDLTVTEVCF AVGCTSLGSF SSRFTELVGE SPSSYRARSH DDGAAIPACV
AKIYTRPVRN GEARPDSPPL V