Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3021 |
Symbol | |
ID | 8666308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3293050 |
End bp | 3294072 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC-type transport system involved in resistance to organic solvents periplasmic component-like protein |
Protein accession | YP_003338716 |
Protein GI | 271964520 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTCA AGTCGTTCCG CGACCGCAAC AAGACCGTCG TCGGCCTGGT GTCGATGGCG ATCCTCGCCT CCGTCCTGGT GGCCACCTTC CTCGTCGGCA ACCTGGGGCT GCTGGAGGGC GGCTACACGA TGTCGGCGAT ACTGCCGGAC TCCGCCGGGC TGCGTTCCGG CAACGACGTG CGGGTGGCGG GCGTCCCGGT CGGCAAGGTG ACCGAGGTCC GCGCCGACTA CGGCCAGGGG CACGTCGTGG TCACCTGGAA GGTGGACGAC GGGATCAGGC TCGGCCCGCA GACCCGGGCC GAGATCACCC TGTCGAACCT GCTGGGCGGC CGCTACGTCA AGCTCACCGG GCCGGTCACC CGGCCGTACA TGGACGAGCT GCCGGAGGAG AGGCGGCGGA TCCCGATGTC GCGCACCAGC ACCCCCGTGC TGATCACCGA CGCCCTCAAG GACGCCACCC GGCTGGTGCA GAAGCTCGAC ACCGACTCGG TCGACAAGCT CCTGTCGGAG CTGGCGGAGC TCAAACCCGC CCGCAAGGGC AGGGTCAGCA AGCTGCTGGA CAACATCGGC GAGCTCTCGG AGATCATCAG CGAGAGCGAA CCCCAGCTCC AGCGGCTGCT GGACAACGGC AACAAGATCA TGAACGTGCT GGAGACGAAG GACGCGCAGC TCGGCCGGCT GATCGACTCC ATCGAGATCA TGCTGAGCGA GCTACGGCTC CGCCGCGACG AGCTGAAGTC CCTGCTCGGT GACGGCAGCG ACCTGGTCAA CAGCATCACC GCGCTGGTCA CCGAGCACGA GAAGAACCTG ATCGCGGTGG TCGACGACGT GACCGCGATC GGCAACCGGC TCGACGGCAA CGGCAAGGCG CTCAACTCCG TCCTCGCCTG GGTCGGACCC ACCTTCTCCG GACTGGCCAC CTCCGGCGGC CAGGGCCCGT GGGTGGAGGC CATCACCACC GGCCTCGGCC CGATCAACCC CGAGGTGCTC GGCGCCATCC GCAAGGACAG GACCAGCCGA TGA
|
Protein sequence | MALKSFRDRN KTVVGLVSMA ILASVLVATF LVGNLGLLEG GYTMSAILPD SAGLRSGNDV RVAGVPVGKV TEVRADYGQG HVVVTWKVDD GIRLGPQTRA EITLSNLLGG RYVKLTGPVT RPYMDELPEE RRRIPMSRTS TPVLITDALK DATRLVQKLD TDSVDKLLSE LAELKPARKG RVSKLLDNIG ELSEIISESE PQLQRLLDNG NKIMNVLETK DAQLGRLIDS IEIMLSELRL RRDELKSLLG DGSDLVNSIT ALVTEHEKNL IAVVDDVTAI GNRLDGNGKA LNSVLAWVGP TFSGLATSGG QGPWVEAITT GLGPINPEVL GAIRKDRTSR
|
| |