Gene Sros_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3012 
Symbol 
ID8666299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3284712 
End bp3285389 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003338707 
Protein GI271964511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.218964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTC GCCGGATCCT CATCGCCGCG CTGGTCGCCG CGCTCTCCCT TGTCACCGCG 
TGCAGCGGCG GCTCCTCCGA CGACCAGGCG GCGCTGCCCG GCGGGAGCGA GCTCGTCAAG
AAGTCCGCGG AGGCGATGCG AGGCGCCAAG TCGGCCGCCT TCACCATGGA GACCGAGGGC
ACCCCGCCGG TGCCGGTCAA GAAGGCCACC GGCCGTCTCA GCGGGACCGG CGACGCCGAC
GGCACCATCA ACATCGATCT GGCGGGCAGC CTCCAGGAGA TCCAGTTCGT CCTGATCGGA
GAGACCGTCC ACTTCAAGGG CGTGACCGGC GGCTTCCAGA AGATATCGCG GAGCCAGCTC
GCCGCGATCT ACGACCCGTC GGCCATCCTC AACCCTGACA AGGGCATCGT CCAGCTTCTG
GGCACCGCGC TGGACCCGAA GACCGAGGCC GTGGAGAAGG TGGACGGCAC CGACGCCTAC
CGGGTCGCCG CCACGCTCTC CCAGCAGGTC CTCGCCACGA TGGTGCCGGG GCTCTCGCAG
GGGGTCAACG GACGGCTCTG GATCGACAAG GCCACCAGCC GCCTGCTCAA GGCCGACCTG
CCGATGAACG GCGGCAAGGT GATCGTCACC TTCCGCGACT ACGACGTGCC GGTCCAGGTC
ACCGCGCCGG CGGAGTGA
 
Protein sequence
MSARRILIAA LVAALSLVTA CSGGSSDDQA ALPGGSELVK KSAEAMRGAK SAAFTMETEG 
TPPVPVKKAT GRLSGTGDAD GTINIDLAGS LQEIQFVLIG ETVHFKGVTG GFQKISRSQL
AAIYDPSAIL NPDKGIVQLL GTALDPKTEA VEKVDGTDAY RVAATLSQQV LATMVPGLSQ
GVNGRLWIDK ATSRLLKADL PMNGGKVIVT FRDYDVPVQV TAPAE