| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2988 |
|---|
| Symbol | |
|---|
| ID | 8666275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 3259063 |
|---|
| End bp | 3260214 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | 2-nitropropane dioxygenase family oxidoreductase |
|---|
| Protein accession | YP_003338685 |
|---|
| Protein GI | 271964489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.132342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCG CGATCTGTGA GAGATTCGGC GTCGAGTTCC CCCTCTTCGC CTTCAGCCAC
TGCCGCGACG TGGTCGCCGC GGTGACCAAC GCGGGCGGGA TGGGCGTGCT CGGCGCCGTC
GCCTACTCCC CCCGGCAGCT CGACGCGGAA CTGAACTGGA TCGACGAGCG GGTCGGCGGC
CGGCCGTACG GCGTGGACGT CCTCGTCCCC GGCGGGATCG ACGCGTCGGC GGCCGACCGG
AGCGCCCGGC TCCTCGACGT CATCCCCGAA CGGCACCGCG ACTTCGTGAC GCACCTGTTC
GGCAAGTACG GGGTGAGCCT GCCGGAGCCG TTCACCGGGG CCATGTCGGC CTACGCCGAC
GAGATGGGAC GCCGGGTGAC CGCCGAGGGC GCGACCGGCC TCGTCGACGT GGCGCTCAAG
CACCCGATCG GCCTCATCGC CAGCGCGCTC GGCCCGCCTC CGCCGGAGAT GGTGGCCAAG
GCCCGGGAGG CCGGGGTCCC GGTCGCCGCG CTGGTCGGAA CCGTCGAGCA CGCCCGGCGC
CAGGTGGCCG CGGGAGCCGA GGTGATCGTG GCACAGGGGT CGGAGGCGGG CGGGCACACC
GGCGAGATCT CCACCATGGT GCTGGTTCCC CAGGTCGTGG ACGCCGTGGA CGTCCCGGTG
CTGGCGGCGG GCGGCATCGC CTGCGGCCGC CAGATGGCCG CCGCGCTCGC GCTGGGGGCC
GAGGGGGTGT GGTGCGGCTC GGTCTGGCTG ACCACGGAGG AGGCCGAGAC CCTGCCCTCG
GTCAAGCAGA AGATGCTGGC CGCCACCTCC TCCGACACCG TCCGGTCCCG GTCGCGGACC
GGCAAGCCCG CCCGGCAGCT GAAGTCCGCC TGGACCGAGG AGTGGGACGG CTCGCAGGAG
AGCCCGGGAC CGCTGCCGAT GCCGCTGCAG ATGCTGCTGG CCGAGGGGGC GATGGCCCGG
ATCGGCCGGG CGGCCGACAG CGGCGACCCC GGCGCCGGGG AGCTCGTCAA CTACTTCGTC
GGGCAGGTCG TGGGCCAGAT GAACCAGGTC AGACCGGCCC GCCGGGTCGT CCACGACATG
ATCGAGGAGT TCGCCACCGC CGCGGAGCGC CTTGAGGCCG TCACCGGCGG CGGGCATCGC
CGTGAACCGT GA
|
|---|
| Protein sequence | MRTAICERFG VEFPLFAFSH CRDVVAAVTN AGGMGVLGAV AYSPRQLDAE LNWIDERVGG
RPYGVDVLVP GGIDASAADR SARLLDVIPE RHRDFVTHLF GKYGVSLPEP FTGAMSAYAD
EMGRRVTAEG ATGLVDVALK HPIGLIASAL GPPPPEMVAK AREAGVPVAA LVGTVEHARR
QVAAGAEVIV AQGSEAGGHT GEISTMVLVP QVVDAVDVPV LAAGGIACGR QMAAALALGA
EGVWCGSVWL TTEEAETLPS VKQKMLAATS SDTVRSRSRT GKPARQLKSA WTEEWDGSQE
SPGPLPMPLQ MLLAEGAMAR IGRAADSGDP GAGELVNYFV GQVVGQMNQV RPARRVVHDM
IEEFATAAER LEAVTGGGHR REP
|
|---|
| |