Gene Sros_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2980 
Symbol 
ID8666267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3248170 
End bp3248943 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID 
Productputative SpoOM-related protein 
Protein accessionYP_003338677 
Protein GI271964481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.771223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTCC GTAAGCTGAT GGCCGCGTTC GGCGCGGGTG TCGAGGTCGA CACGATCCTG 
CAAAACTCCA ACGTCCGCCC CGGCGAGGTC CTGCGCGGGC AGGTCAACTT CCGCGGCGGC
GGCTCCGACT ACAAGGTCGA GGGCATCTTC ATCGACTTCA CCGCGGTGGT CGAGGTCGAG
AGCGGCGACA ACGAGCACAA GTCGACCTAC AGTTTCCTGC GCAAGCAGAT CACCGGCCCG
TTCCACCTCG CGGCGGGCGC CCCGCAGTCG GCCCCCTTCG AGATCCCCGT CCCGTGGGAG
ACCCCGATCA GCGCCATCGG CGGCCACCCG CTGCGCGGCA TGCAGCTCGG TGTCTCCACC
GAGCTCGCCC TGGCCGGCGC GCTGGACAAG GGCGACCTCG ACCCGCTGTT CGTCAACCCG
CTGCCCGCCC AGGACCACGT GCTCGGCGCG CTGGACAACC TGGGGTTCCG CTTCAAGAAG
GCCGACCTGG AGCGCGGCAC CCTGCGCGGC TCGCAGATGC CGTTCTTCCA GGAGATCGAG
TACTACGCGG GCCACGAGTA CGCCCGGCAC TTCAACGAGC TCGAACTGAC CTTCATCGCC
GGTCCGCAGG CGATGGACGT CATCCTGGAG GCCGACAAGC GCGGCGGCTT CATGAGCTCC
AGCCACGACA CCTACAACCG CTTCACGGTC CGCTACAACG ACCACCCGGG CCAGGTCGAG
CAGTCGCTCC GCGCCGGTCT TCACGCGATG GCGCAGAAGC GCGGCTGGTT CTGA
 
Protein sequence
MVFRKLMAAF GAGVEVDTIL QNSNVRPGEV LRGQVNFRGG GSDYKVEGIF IDFTAVVEVE 
SGDNEHKSTY SFLRKQITGP FHLAAGAPQS APFEIPVPWE TPISAIGGHP LRGMQLGVST
ELALAGALDK GDLDPLFVNP LPAQDHVLGA LDNLGFRFKK ADLERGTLRG SQMPFFQEIE
YYAGHEYARH FNELELTFIA GPQAMDVILE ADKRGGFMSS SHDTYNRFTV RYNDHPGQVE
QSLRAGLHAM AQKRGWF