Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2975 |
Symbol | |
ID | 8666262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 3238495 |
End bp | 3244200 |
Gene Length | 5706 bp |
Protein Length | 1901 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | WD40 repeatdomain-containing protein-like protein |
Protein accession | YP_003338672 |
Protein GI | 271964476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCG ACGACAGGCC GGTCGACATC TTCGTCAGCT ACTCCCCCGC CGACGAGCGC TGGGCGTCGT GGATCGCGTG GGAGCTGGAG GCCGCCGGAT ACCGGACGAT GATCCAGGCC TGGGACTTCG TGCCGGGAAC CCAGTTCATC GAGTTCATGG ACCGGGGGGT CAGCGAGGCC GCGCTCGTGG TGGCGGTGCT GTCGCGCAAC TACCTCAAGT CGCGCTGGGG GCGGATGGAG TGGCAGGCCG CGCTCCGCGC CGATCCGGAC AACCCCTCCA ACAAGCTGGT CACGATCCGG CTGGAGGACT GCCCGCTGGA GGGACTGCTG TCCACGATCA CCTGGGTGGA CCTGGTCGGG GTCGCCGATC CGGACCAGGC GCGGGCGCTG CTGCTCAACC GGATCGGCCA GGCTCTGGCG GGCCGGGCCA AACCGCTGGA CCGGCCGTCG TTCCCCAACG GCCCGGCGAC CATCCCCGGC GAGGTGCTGC CCGCGCCGTC CGGGCGCGGG CAGGCGCGGG CCCGCCGTAC CCCGGTGGCG CCGCCCGCGT ATCCGGCGGG GCCGTCGGCG CACGTCCCGC GCGAGTCGAT CACGCTGCTG CACGTCGCCG GCCCCCGGTT CGGCCGGGGG CTGGCCGACG AGGACGAGCC GCTGACGGCC GAGGAGCTGC AGCCGAGGAT CTGGGCCGAC CTCACCCGGC TGCGGGACGC CGGGCTGCCC CGGCCGGACC TGATGGTCGT GACCGGAGAC CTGACCGAGT CGGGCGGCCG CCGGGAGTTC GGCGAGGCGG CGGCGTTCCT GACCGGGCTG CGGGTGCTGC TCGGACTGGA GCCGCAGCGG CTGATCGTCG TACCCGGTCC GAGGGACATC ACGAAGGCCG CCTCCCGGGC GTACTTCAGC AACTGCGAGG CCGACGACGT GCGCCCGCAG CCGCCGTACT GGCCCAAGTG GCGCCACTTC ACCGGCCTGT TCGAGGAGCT CTACCTCGGG CTCGACGGAC CGGAGTTCGA CAGCGCCCAG CCGTGGACGC TCTTCGCCGT CCCCGATCTG AAGGTCGTGG TGGCCGGACT GAACTCCACC ATGGCCATGA GCCACCGCGA GGAGGACCGG TACGGCTCCG TGGGCGAGGC GCAGGCGGCG TGGTTCGCCG AGCGGCTGCG GCCGTTCGAG GAGGCGGGCT GGCTGCGGAT CGGCGCGGTC GCCCACCCGC CCGCTCCCGC GCACCTGCGC GACACCTCGA CGCTTGAGCA TCTGCTGGCC GGGCGGCTCA ACCTGCTGCT GCACGGCGCG GGCGGCACCG GCCCGGAGAG CCTGACCTGC CTGCCCGCTC CGGGGCCGGG CCGCCACCAG CTCGTCGAGG TGACCTCCGG CGGCCTGCGC CGCTGGGACC GCGACCGGGC CGCCCTCCTG CCCGCCGAGG AGCTGTCACG CGCCTGGCAC GGGACGGGGC TGACGTTCTC CCCCGGGGGC GGCGCGCCCG CCGCCCTGCC GCCGGCGGCT CCCCCCGCGG CGGCCGAGCC CAAACGGGCG GCCGCCCCGG CCATGCTGCT GCTGGACCGG ATCGCCGAGG TCTGCGAGGC CCGGCACGAG CGGGTCAAGA TCAGGAGGGT GGTCGGCGAC GTCCCGCAGC TTCTGGTCAC CTATCCGGAG GACGGCTTCG TCCGGCAGCT CAGGATAGGC GCCCACGCCG GCGAGCTGAC CGGGCAGGAC GTGGAGGCCT TCGCCGGGCA GGTGCACGCC TCCGGGCTGG AGCACGGCGC CGAGCTGGTC TACCAAGGGC CGCCGCCCGC GCAGGCGCTG CGCGAGGAGA TGACCCGGCG CGGGCTGCGG CTGCGCAGCT TCACCGAGTT CCAGGGACTG CTCGACCTGA CCGGATACGT GGCCGACCAG ACAGCGCGGC TGCGCGGGGA CCGCCGCTAC CCGCAGGGGC TGTACGTGCC GCAGCGTTTC CGGGAGCTGG ACCGTCCCGA CCGGCGCGTC CGGGAAGGGC TCACCGACGA GCTGATGCGG TTGCTGGCCA CCGACCACGG CCGGTTCCTG CTGGTGCTGG GCGACTTCGG GCACGGCAAG ACCTTCGCCC TGCGCGAGCT GGCCCGGCGG ATCCCGGTGG AGCTGCCTCA CCTGGTGCCG ATCCTGATCG AGCTGCGCGC GCTGGACAAG GCGCACTCGG TGGACGGGCT GGTCGCCGCG CACCTGGCCA ACCACGGCGA GGACGTCATC GACCTGAAGG CCTTCCACTA CATGCTCCGC CAGGGCCGCA TCGTGCTGCT GTTCGACGGG TTCGACGAGC TGGTGACCCG GGTGACCTAC GACCGGGCCG CCGACCATCT GGACACGCTG CTGCAGGCCG CCGAGGACAA GGCGAAGATC GTCGTGGCCA GCCGTTCCCA GCACTTCAAG TCCAGCGCCC AGGTGCTCAC CAAGCTCGGC GAGAAGGTGG GCCTCCTGCC GCAGCGGCGC CTGCTCAGCG TGGAGGACTT CACCGGCCCG CAGATCCGCT CCTACCTCGT CAACCGCTAC GACGGCGACG AGGGCGCCGC CGGAGACCGG CTCTCGCTGA TGAGCGACAT CGAGGACCTG CTGGGCCTGG CCAGGAACCC GCGCATGCTC AGCTTCATCG CCGACCTCGA CGACCAGCGC CTGGCCACCG TCGCCAAGGC CCGGCACACC ATCAGCGCGG CGCTGCTGTA CGAGGAGATC ATGGGCTCCT GGCTCGCCTT CGAGGAGCGC CGGGTGCGGG ACGTGCCGGG CGCGCCGGCC GGGCTGCGCG CCGGGGAGCT GCGGCAGGCG GTGACCACGC TGGCGCTGCG GCTGTGGGAG AGCGGGGAGG CCTACCTGCG GCCGGCGGAG CTGGCCGAGA TCGCCGAGAC GCTGACCGGC CTGGCGGACG GGCAGCTGTC GGGCCAGCAG ACCGCGCACG CGGTGGGGAC CGGCAGCCTG ATGGTCCGCA CCGAGGAGGG GCTGTTCGGG TTCATCCACT CGTCGGTCAT GGAGTGGCTG GTCGCCCGGC ACATCGCCAT GACCTTCGCC GACCCGGTGA CGCTCGCGCG CAGGCCGCTG TCTCAGCTCA CGGTGGACTT CCTGTGCGAC CTGGCCGACG TGCGCGCCTG CCAGGCCTGG GCGGCGGACG TTCTCGCCGA CCCCGGCGCC GACGACGTCT CCCGGACCAA CGCCATCAAG ATCACCACCC GGTTGCGCAC CCCGGCCATG ACCGACCTGC GCGGCGCCAA CCTGCGCGGC GAGGACCTGT CCGCGCGCGA CCTGCGGGAG GTCGACCTCA CCGGGGCCAA CCTGACCGAC GCCACCCTGG TCGGGACCGA CCTGTCGCGC GCCGTGCTCC GTGACGCCCG GCTGACCGGA GCCCGGCTGG ACGAGGCCCG GCTCACCGGC GCCGACCTGC GCGGCGCCGA CCTGACGCGG GCCCGGCTGG CCAGGGCGGA CCTGCGGGAC GTGGCGGTGG CGGGCAGCCG CTGGCAGCGG GCGGCGCTGA TCGACGTCAC CGGCACGGTG GCCGGTGTCC CCGAACTCCG CGGCGCCGCG ATCGCACCTG GCCAGCCGGT GGAGGTCCAG CTGGCCCCGG CCGCGATCGG CGTGCCGTAC GGCTACCACT TCCAGACCAG CAGGCTGCCC GAGCCCGTCG CCTACAGCCC CGACGGCGAG ACCCTGGTGA TCGGCGGCGA CGACGGCGGG GTGCTGCTCT GCGACAGCGC CACCGGCCTG CCGGTCAGAA ACCTGCAGGG TCATCGGGGC CGGGTCTACG CCGTCACCTT CAGCCGCTCG GGCGACCTGC TCGCCACCGG GGCGAGCGAC GGCACGGTCC GGCTCTGGGA CCCGGTCACC GCGAGCGCCT CCCACGTGCT CGCCGGGCAT CGCGACGGCG TGTGGCCGGT GGTGTTCAGC CCCGCCGGGC GGCTGATCGC CGCGGGCGGC GCCGACGGCA CCGTACGGAT CTGGGACACC GCCACCGGCC TGCCGTACCG GGAGCTCCCC GGCCACCTGG CGCCGATCTA CACCGCGACG TTCGACGCGG GCGGCGACAC GCTCGTCACC GGCGACGCGG GCGGGACGGT ACGGATGTGG GACGTGCGGA CCGGCGAGAT CGTCCGGACC CTGGACGGGC ACCGCGGCTC CGTCTACCGC ATCGCCTACG ACCCCGGCGG CACGCTGCTG GCCGCCGGCG ACCGCGAGGG CGTGGTGCGG ATCTGGGATC CCCGGGACGG GCAGGTCCTG CACGCGCTGA CCGGGCACAC GGGCAGCGTC TACGCGCTGT CCTTCGCGCC CTCCGGCCGG CTGCTGGCGA CCGGCGACAC CGACGGCGCG ATCCGGCTGT GGGACCCGGT CTCGGGCGCC TCGCGCGGCA TGCGGACGGG CCATCGGGCG GCCGTCTACC AGGTCGGCTT CAGCCCGGAC GGCTCGCTGC TGGCCAGCGC CGACTCCGAC GGCGCGGTCC ACCTGCACGG GGTCGCCGAG GAGCGCGAGC GGGTGGAGCT GGCCGGGCAC CGCGGCTCCG TCTGGCCGTT CGCCTTCCGG CCCGGCGGCG GCCAGCTGGC CACCAGCAGC AACGACGGCA CCGTCCGGCT CTGGGACACC GCCACCGGGC AGTGCCGGCG CGTCCTGCGC GGTCACGGCC GCAAGATCAC TTCAGTGCGG TTCAGCGCCG ACGGGAGCAT GCTGGCGACC AGCGGCAACG ACGGGGTCGT GCGGATCTGG GAGCCGCGCA CGGGCCGCCG GCTGCGGGAG CTCACCGGGC AGGCCGACCG GCTCATCTCC GCCGCCTTCA GCCCCGCCGA CCCCACGATC GCCGCCGCGA GCAACGACGG CGGGGTGCAC TTCTGGAACG CCGCCACCGG CGACTACGAG CGCGAGCTGG ACGTCGAGAC CGACCACGTG TGGGCTGAGG CGTTCAGCCC CGGCGGGGAC CACCTCGCCA CCGCCAACGA CGACGACAGC GTCCGCGTCT GGTACCGGGC GAGCGGCCGC CAGGTCGTCA AGCTCGCCGA CCACCACGGC CGGGTCCGCT CCATCGCCTT CAGCCCCGAC GGCCGCCACG TGGCCACCGG CTGCGACGAC CGGCTGGCGC GGGTCTGGGA GGTCGAGACC GGCACGTGCG TGGCGATCCT GGAGGGCCAC ACCGACCGGG TGTACTCGGT GGTCTTCAGC CCCGACGGAA GCACGCTGGC CAGCGCCGGC AACGACGGCG ACGCCCGCGT GTGGGACCTG CGGCCGGATC CGCGGCCGGG CCACCCGTGG CGCCCCAGGC TGCTCCACAC CCTCACCCGC CACCCCGGAC GGCTGTGGAC CGTCGCCTTC AGCCCGGACG GCTCGCTGCT GGCCACCGGG GGCGACGACC CGGCGGTGCG GCTCTGGGAC GCCCGTACCG GCCGGCACCT GCACGCGCTG ACCGGCCACA CCCGCCGGAT CTGGTCGCTG GCCTTCGCCC CCGCCGGGGA CCTGCTGGCC AGCGCGGGCG ACGACGGCGT GGCGATCCTC TGGGAGCTCC ACCCCGGTAC GGCTCCCGCC CAGCGGGTGG CCCTCCTCGG CCTGCCGGAG GGATGGGCGG CGATCGCGCC GGACGGCCGC TACAAGCTGG CGGGCGAGGT GGCAGGCCAG TTCTGGTACG TCGTCGGGAC CCGCAGGTTC GAGCCCGGAG AGCTGGACGC CTACCTGCCC GCGATCGGGC AGATCGCGCT GGACGCGGAG TTCTGA
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Protein sequence | MARDDRPVDI FVSYSPADER WASWIAWELE AAGYRTMIQA WDFVPGTQFI EFMDRGVSEA ALVVAVLSRN YLKSRWGRME WQAALRADPD NPSNKLVTIR LEDCPLEGLL STITWVDLVG VADPDQARAL LLNRIGQALA GRAKPLDRPS FPNGPATIPG EVLPAPSGRG QARARRTPVA PPAYPAGPSA HVPRESITLL HVAGPRFGRG LADEDEPLTA EELQPRIWAD LTRLRDAGLP RPDLMVVTGD LTESGGRREF GEAAAFLTGL RVLLGLEPQR LIVVPGPRDI TKAASRAYFS NCEADDVRPQ PPYWPKWRHF TGLFEELYLG LDGPEFDSAQ PWTLFAVPDL KVVVAGLNST MAMSHREEDR YGSVGEAQAA WFAERLRPFE EAGWLRIGAV AHPPAPAHLR DTSTLEHLLA GRLNLLLHGA GGTGPESLTC LPAPGPGRHQ LVEVTSGGLR RWDRDRAALL PAEELSRAWH GTGLTFSPGG GAPAALPPAA PPAAAEPKRA AAPAMLLLDR IAEVCEARHE RVKIRRVVGD VPQLLVTYPE DGFVRQLRIG AHAGELTGQD VEAFAGQVHA SGLEHGAELV YQGPPPAQAL REEMTRRGLR LRSFTEFQGL LDLTGYVADQ TARLRGDRRY PQGLYVPQRF RELDRPDRRV REGLTDELMR LLATDHGRFL LVLGDFGHGK TFALRELARR IPVELPHLVP ILIELRALDK AHSVDGLVAA HLANHGEDVI DLKAFHYMLR QGRIVLLFDG FDELVTRVTY DRAADHLDTL LQAAEDKAKI VVASRSQHFK SSAQVLTKLG EKVGLLPQRR LLSVEDFTGP QIRSYLVNRY DGDEGAAGDR LSLMSDIEDL LGLARNPRML SFIADLDDQR LATVAKARHT ISAALLYEEI MGSWLAFEER RVRDVPGAPA GLRAGELRQA VTTLALRLWE SGEAYLRPAE LAEIAETLTG LADGQLSGQQ TAHAVGTGSL MVRTEEGLFG FIHSSVMEWL VARHIAMTFA DPVTLARRPL SQLTVDFLCD LADVRACQAW AADVLADPGA DDVSRTNAIK ITTRLRTPAM TDLRGANLRG EDLSARDLRE VDLTGANLTD ATLVGTDLSR AVLRDARLTG ARLDEARLTG ADLRGADLTR ARLARADLRD VAVAGSRWQR AALIDVTGTV AGVPELRGAA IAPGQPVEVQ LAPAAIGVPY GYHFQTSRLP EPVAYSPDGE TLVIGGDDGG VLLCDSATGL PVRNLQGHRG RVYAVTFSRS GDLLATGASD GTVRLWDPVT ASASHVLAGH RDGVWPVVFS PAGRLIAAGG ADGTVRIWDT ATGLPYRELP GHLAPIYTAT FDAGGDTLVT GDAGGTVRMW DVRTGEIVRT LDGHRGSVYR IAYDPGGTLL AAGDREGVVR IWDPRDGQVL HALTGHTGSV YALSFAPSGR LLATGDTDGA IRLWDPVSGA SRGMRTGHRA AVYQVGFSPD GSLLASADSD GAVHLHGVAE ERERVELAGH RGSVWPFAFR PGGGQLATSS NDGTVRLWDT ATGQCRRVLR GHGRKITSVR FSADGSMLAT SGNDGVVRIW EPRTGRRLRE LTGQADRLIS AAFSPADPTI AAASNDGGVH FWNAATGDYE RELDVETDHV WAEAFSPGGD HLATANDDDS VRVWYRASGR QVVKLADHHG RVRSIAFSPD GRHVATGCDD RLARVWEVET GTCVAILEGH TDRVYSVVFS PDGSTLASAG NDGDARVWDL RPDPRPGHPW RPRLLHTLTR HPGRLWTVAF SPDGSLLATG GDDPAVRLWD ARTGRHLHAL TGHTRRIWSL AFAPAGDLLA SAGDDGVAIL WELHPGTAPA QRVALLGLPE GWAAIAPDGR YKLAGEVAGQ FWYVVGTRRF EPGELDAYLP AIGQIALDAE F
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