Gene Sros_2963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2963 
Symbol 
ID8666250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3226444 
End bp3227292 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_003338661 
Protein GI271964465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.207338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC AGTCGACGAA GACCGAGCCC GGTCCTGACG GGGGCATCCC TGTCAGGACC 
GGGCTCAGCC CCCGCAAGAA ACAGCAGATC AGCAGGGCTG TCCAGTACGT CGTGCTGGCG
GCCGCGGTCG TCTTCCTCCT CCTGCGCATC GAGTGGGGCA AGCTCGCCGA GAACTTCGCC
AAGCCCGAGG TCGCGGCCGA GACGCTGCCG GACCTGTTCA CGGTCGCCCT GAAGAACACG
ATCATCTACT CGGTCGGCGG TTTCTTCTTC GCCTTCCTGC TCGGCCTGCT GTTCGCGCTG
ATGCGGATGT CCTCGGTACG GCCGTACCGG TGGATCGCGA TCGCCTACAT CGAGATCTTC
CGTGGCCTGC CCGCCCTGCT GATCTTCCTG CTCATCCTGT TCCTGCCGCT GGCCCTGCCG
GGCTTCGAGG TGCCCGGCGG CACCTACGGC CAGGGCATCC TGGGCCTGAC CATCGTCGGC
TCGGCCTACA TGGCCGAGAC GCTGCGCGCC GGACTCCAGG CGGTCCCCAA GGGGCAGATG
GAGGCGGCGC GCTCGCTGGG CATGTCGCAC GCGCGGGCCA TGACGACCAT CGTCATCCCG
CAGGCGGTGC GCATCGTGAT CCCGCCGACG ACCAACCAGT TCGTGTCCCT GCTCAAGGAC
TCCTCGCTGG TGCTGTTCCT CGGCGTCTCC GGTGAGTACG TCGAGCTCAC GAAGTTCGGC
AACGACATGG CCTCGACCTT CGCCAACGCC ACGCCGATCC TGGTGGTCGG CGTGACGTAT
CTTCTGGTCA CCATTCCGCT GGGCTACCTC GCGTCCCGGC TGGAGAAGCG TCAGGCGAGG
GGACGGTGA
 
Protein sequence
MTDQSTKTEP GPDGGIPVRT GLSPRKKQQI SRAVQYVVLA AAVVFLLLRI EWGKLAENFA 
KPEVAAETLP DLFTVALKNT IIYSVGGFFF AFLLGLLFAL MRMSSVRPYR WIAIAYIEIF
RGLPALLIFL LILFLPLALP GFEVPGGTYG QGILGLTIVG SAYMAETLRA GLQAVPKGQM
EAARSLGMSH ARAMTTIVIP QAVRIVIPPT TNQFVSLLKD SSLVLFLGVS GEYVELTKFG
NDMASTFANA TPILVVGVTY LLVTIPLGYL ASRLEKRQAR GR