Gene Sros_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2958 
Symbol 
ID8666245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3221651 
End bp3222820 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC-type branched-chain amino acid transport system permease component-like protein 
Protein accessionYP_003338656 
Protein GI271964460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA AGAATTCCCT GGCAGGCATC CGTCACCGGC TCGGTCAGTA CGGCGACACC 
ATGCACGTCC GCTGGCTGAA CACGCCCGGC TGGCAGCGAT GGATCCTCTA CGTGGCTCTG
ATCGTCGGAG CCCTGCTGCT GCCGTCGGAG AGCATCGGCG GCTTCATGTC GCCCTACACC
GACTGGGCGA GCATCCTGTT CTTCCCGATC GGCACCTATG TGATCCTGGC CATCGGCCTG
AACGTGGTAG TCGGACAGGC GGGCCTGCTG GACCTCGGCT TCGTCGCCTT CTACGCCGTG
GGCGGTTACG CGATGGCGTT GATCGGCACC AGGCTCGGCT GGAACTTCTG GCTGATCCTG
GTGGTGGGCA TCGGGATCTG CGCCCTGTCG GGCATCACTC TGGGCGGGCC GACGCTGCGG
TTGCGCGGCG ACTATCTGGC GATCGTCACG CTGGGCTTCG GTGAGATCAT TCGTATCACC
GCCCGCAACA CCGACGCGAT CGGCGGCCCC AACGGCATCC GCGGCATCCC GCACCCCCCG
AGCATCGACG AGCTGACCAT CTTCGGCGTC GACGTCTACG AGCTCCTCGG GGTGAAGATC
TTCAAGTACG GCGTGCTGGA CCCGCGGCCC TACTACTACC TGCTGGTCGC GCTGGCCGTC
GTCGCGATCA TCCTGGTCAA GCGCTGGGAG AAGAGCCGGG TCGGGCGCGC GTGGGCGGCG
ATCCGCGAGG ACGAGGACGC GGCCGAGGTC ATGGGCGTGC CGACGTTCCG GTTCAAGATG
CTGGCGTTCG CCATCGGCGC CTCGATCGGC GGCGCGATGG GCGTGCTGTG GGCCTCCAAG
GTCATCTCGC TCAACCCGAA CGACTTCCAG TTCCTGCTGT CGGCGACGAT CCTGGCCGCG
GTGGTCATGG GTGGCGCGGG CAACCTGCCG GGCGTCATGC TGGGTGCGTT CGTGGTGGCG
TGGCTGCCAG AGCGCTTCCG CGGCCTGCAG GAATACCGCA TGCTGATCTT CGGCGCGGTG
CTCGTGGCGC TGATGATCTT CCGGCCTGAG GGGTTGCTGC CGTCGCGTCA ACGCAAGGCG
GAGCTGAAAG AGGGAACAGG CGGGATGGGA TCGCTCGGTG CCGATGTGCC CGGGCCGGAG
TCGCGTGGTG AGGAGGTGGC CTCCAAGTGA
 
Protein sequence
MNQKNSLAGI RHRLGQYGDT MHVRWLNTPG WQRWILYVAL IVGALLLPSE SIGGFMSPYT 
DWASILFFPI GTYVILAIGL NVVVGQAGLL DLGFVAFYAV GGYAMALIGT RLGWNFWLIL
VVGIGICALS GITLGGPTLR LRGDYLAIVT LGFGEIIRIT ARNTDAIGGP NGIRGIPHPP
SIDELTIFGV DVYELLGVKI FKYGVLDPRP YYYLLVALAV VAIILVKRWE KSRVGRAWAA
IREDEDAAEV MGVPTFRFKM LAFAIGASIG GAMGVLWASK VISLNPNDFQ FLLSATILAA
VVMGGAGNLP GVMLGAFVVA WLPERFRGLQ EYRMLIFGAV LVALMIFRPE GLLPSRQRKA
ELKEGTGGMG SLGADVPGPE SRGEEVASK