| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2949 |
|---|
| Symbol | |
|---|
| ID | 8666235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3206319 |
|---|
| End bp | 3210824 |
|---|
| Gene Length | 4506 bp |
|---|
| Protein Length | 1501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Glutamate synthase (ferredoxin) |
|---|
| Protein accession | YP_003338647 |
|---|
| Protein GI | 271964451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.341665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCTG CCCACCTCGG CTTTCCCGAG CCCCAGGGCC TCTACCACCC CTCGCACGAG
CACGACGCCT GTGGCGTCGC CATGGTCGCG GACGTGGCCG GCCGCCGCAG TCACGACATC
GTCGCGAAGG CCCTGACGGC GCTCTGCAAC CTCGACCATC GGGGGGCCCA GGGTAGCGAA
CCGGACACCG GCGACGGCGC CGGGATCCTG ACGCAGATCC CCGACACGTT CTTCCGCGCC
GTGACGGACT TCCCGCTGCC CGTGGCGGGC TCCTACGCCG TCGGCACGGC CTTCCTGCCC
GCCGACCCCG AGGCCCGCGC GATCGGCGTG CGGATGATCG AGGAGATCGC GGCGGAGGAG
GGCCTGACGG TCCTCGGCTG GCGCGACGTG CCGACCGACC CCACGCTGCC CGGGCCGAGC
GCCCGCGCGG TGATGCCGTT CTTCCGGCAG ATCTTCGTGG CCTCGCCGCA GGGCGAGAGC
GGCCTGGAGC TGGACCGGCT GGCCTTCTGC CTGCGCAAGC GGGCCGAGCA CGAGGTGGAC
GTCTACTTCC CCTCGCTGAG CGCCCGGACG ATCGTCTACA AGGGCATGCT CACCCCGCCG
CAGGTCGAGC CGTTCTTCCC CGACCTGAGC GACGAGCGCT ACGAGACCGC GATCTCGCTG
GTCCACTCGC GCTTCTCCAC CAACACCTTC CCCTCCTGGC CGCTGGCGCA CCCCTACCGC
TACGTCGCCC ACAACGGCGA GATCAACACG GTCAAGGGCA ACCGCAACTG GATGCGGGCC
CGCGAGGCCA TGCTGGAGAC CGCGGCCATC CCGGGCGAGC TGTCGCGGCT CTTCCCGATC
TGCGACCCCG ACGGCTCCGA CACCGCCTCC TTCGACGAGA CGCTGGAGCT GCTCCACCTC
GCCGGGCGCA AGCTGCCGCA CGCGGTGCTG ATGATGATCC CCGAGGCGTG GGAGAACCAC
ACCGAGATGG ACCCCGCGCG GCGGGCGTTC TACGAGTTCC ACTCCACGCT GCTCGAGGCC
TGGGACGGCC CTGCCTCGAT CACCTTCTCC GACGGCACCC TGGTCGGCGC GGTCCTCGAC
CGCAACGGCC TGCGCCCGGG ACGGTTCTGG GTCACCAGGG ACGGCCTCGT CGTGCTGGCC
TCCGAGGCCG GTGTGCTCGA CATCGCGCCG CAGGACGTGG TCCGCAAGGG CCGCCTGCAG
CCGGGCAAGA TGTTCCTGAT CGACACCGAG CTCGGCAAGA TCATCGAGGA CGACGAGATC
AAGGCGGAGC TCGCCGCCGA GCTGCCCTAC GCCGAGTGGC TGCACGCCGG TCTGGTCCGC
TTCGAGGAGC TGCCCGCCCG CTCGCGTGAG ATCCCGACCC ACGAGGCGCT GATCAAGCGT
CAGCAGACCT TCGGCTACAC CGAGGAAGAG CTGCGGATCA TCCTGTCGCC GATGGCCAAG
GTGGGCGCCG AGCCGATCGG CTCGATGGGC ACCGACACCC CGGTCGCGGT GCTCAGCGAG
AAGCCCCGGC TGCTGTTCGA CTACTTCAGC CAGCTTTTCG CGCAGGTCAC CAACCCGCCG
CTGGACGCCA TCCGCGAGGA GCTCGTCACC TCCCTGGCCA GCACCCTCGG CCCCGAGGGC
AACCTGCTCG ACCCGGGCCC GGCCTCCTGC CGCCAGCTCG TGCTGCCGTA CCCGGTGATC
GACAACGACG AGCTCGCGAA GATCATCCAC ATCAACGACG AGGGCGCGCT GCCGGGCTTC
CACCCGCGCG TCGTCTCCGG CCTGTACGAG GTCCGGGGCG GCGGTGAGGC GCTGCTGCAC
CGCCTTGAGG AGATCTGCGC CGAGGTCTCG GCGGCGATCG AGGGCGGGGC GCGCGTCATC
GTGCTCTCCG ACCGGGGCTC CTCCGACGTG CTGGCGCCGA TCCCGTCGCT GCTGCTCACC
GGCGCGGTCC ACCACCACCT GATCGCCGAG AAGACCCGCA CCCGGGTCGG CCTGGTCATC
GAGACCGGCG AGGCCCGCGA GGCCCACCAC ATGGCGCTCC TCGTCGGCTA CGGCGCGGGC
GCGGTCAACC CCTACCTCGC CATCGAGACC GTCGAGGACA TGGTCGACTC CGGCGTCCTG
GCGATCGACA AGCACAAGGC CGTGCGCAAC CTCATCAAGG CGTACGGCAA GGGCGTGCTG
AAGGTCATGT CCAAGATGGG CGTGTCCACC GTCGCCTCCT ACACCGGCGC GCAGATCTTC
GAGGCGCTCG GGCTCGGCCA GGACGTCATC GACGCCTGCT TCACCGGGAC GACCTCCCGC
CTGGGCGGCA TCGGCTTCGA CGTCCTGGCC CAGGAGGTCG CGCTCCGCCA CGGGCGGGCC
TACCCGCGGG CCGAGAACGC CCACCGCCGC CTGGAGGTCG GCGGGGAGTA CCAGTGGCGC
CGCGAGGGCG AGCCGCACCT GTTCAACCCC GAGACCGTCT TCAAGCTGCA GCACGCCACC
CGCTCGCGCC GCTACGAGAT CTTCAAGGAG TACACCGGCC TGGTGGACTC CCAGGCCGAG
AAGCTGATGA CGCTGCGCGG CCTGTTCAAG TTCAGGGACG GCGTCCGCGA GCCGGTCCCG
ATCGACGAGG TCGAGCCGGT CTCCGAGATC GTCAAGCGGT TCTCCACCGG CGCGATGTCC
TACGGCTCCA TCTCGATGGA GGCGCACGAG ACCCTCGCTA TCGCGATGAA CCGGCTGGGC
GGCAAGTCCA ACACCGGCGA GGGCGGCGAG GACCCCGAGC GGCTCTACGA CCCCGCCCGC
CGCTCCGCCA TCAAGCAGGT GGCCTCGGGC CGCTTCGGCG TGACGTCGGA GTATCTGGTC
AACGCCGACG ACCTGCAGAT CAAGATGGCC CAGGGCGCCA AGCCCGGCGA GGGCGGCCAG
CTGCCCGGCC ACAAGGTCTA CCCGTGGATC GCCAAGACCC GGCACTCCAC CCCGGGCGTC
GGCCTCATCT CGCCGCCGCC GCACCACGAC ATCTACTCCA TCGAGGACCT CGCCCAGCTC
ATCCACGACC TGAAGAACTC CAACCCGGTC GCCCGCGTGC ACGTCAAGCT CGTGGCCGAG
GTCGGCGTCG GCACGGTCGC GGCGGGCGTG TCCAAGGCGC ACGCCGACGT GGTGCTCATC
TCCGGCCACG ACGGCGGCAC CGGCGCCTCC CCGCTGACCT CGCTCAAGCA CGCGGGCGCG
CCCTGGGAGC TCGGCCTGGC CGAGACCCAG CAGACACTGC TGCTCAACGG CCTGCGCGAC
CGGATCGTGG TGCAGGTGGA CGGCCAGCTC AAGACCGGCC GCGACGTGGT CGTCGCCGCG
CTGCTCGGCG CGGAGGAGTA CGGCTTCGCC ACCGCCCCGC TGGTCGTCTC CGGCTGCGTG
ATGATGCGCG TCTGCCACCT GGACACCTGC CCGGTCGGCG TCGCCACCCA GAACCCCGAG
CTGCGCAAGC GGTTCACCGG CAAGCCCGAG TTCGTGATCA ACTTCTTCGA GTTCATCGCC
GAGGAGATCC GCGAGCACCT CGCCGCGCTG GGCTTCCGCA GCCTCGACGA GGCCATCGGC
CACGCCGAGC TGCTGGACAC CACCTCGGCC GAGAACCACT GGAAGGCCGC GGGCCTGGAC
CTGGCGCCGA TCCTGCACCA GCCGGAGCTG CCCGAGGGCA CCGCGCTCCG CCGTACGCAG
GAGCAGGACC ACGGGCTGGA CAAGGCGCTG GACCACACGC TGATCCAGCT CGCCGAGGGC
GCGCTGGACC ACGGCCGGCG GGTCACCCTG GAGCTGCCCA TCCGCAACGT CAACCGCACG
GTCGGCACCA TGCTCGGCCA CGAGGTGACC AGGCGGTACG GCGGAGCGGG TCTCCCCGAC
GACACCATCG AGGTCCGGTT CACCGGCTCG GCGGGCAACT CCTTCGGCGC CTTCGTGCCC
CGGGGCGTCA CGCTGCGGCT GACCGGCGAC GCCAACGACT ACCTCGGCAA GGGCCTGTCG
GGCGGCCGGA TCACGGTCCA GCCGCACGAC GAGGCGCCGC TGGAGGGCCA CATCATCGCC
GGCAACGTCG GCCTGTACGG CGCGACCTCC GGCGAGGTGT TCGTCCGCGG GGTCATGGGG
GAGCGGTTCT GCGTCCGCAA CTCCGGCGCC ACCGCGGTCG TCGAGGGCGT CGGCGACCAC
GGCTGCGAGT ACATGACGGG CGGCAAGGTG GTCGTCCTCG GCCCGACCGG CCGCAACTTC
GCGGCGGGCA TGTCCGGTGG CGTCGCCTAC CTGCTCGACC TCAACCCGGC GCGGGTCAAC
CGCGAGATGG TGGAGATCGA GTCGCTGGAC GAGGCCGAGT CCGAGACCCT GAGGGAGATC
GTCGAGGCGC ACCTGACGGA GACCGGCTCC ACGGTCGCCA AGGCGCTCCT GACCGACTGG
GACCCGGCCC GGTTCAGCAA GATCATGCCG ACGGACTACA AGCGGGTCCT GAGGGCCGCC
GAGGCCGCGC GCCTCGAAGG CCGCGACATC GACGAGGCGG TCATGACCGC GGCGGTTCAG
GGATGA
|
|---|
| Protein sequence | MPAAHLGFPE PQGLYHPSHE HDACGVAMVA DVAGRRSHDI VAKALTALCN LDHRGAQGSE
PDTGDGAGIL TQIPDTFFRA VTDFPLPVAG SYAVGTAFLP ADPEARAIGV RMIEEIAAEE
GLTVLGWRDV PTDPTLPGPS ARAVMPFFRQ IFVASPQGES GLELDRLAFC LRKRAEHEVD
VYFPSLSART IVYKGMLTPP QVEPFFPDLS DERYETAISL VHSRFSTNTF PSWPLAHPYR
YVAHNGEINT VKGNRNWMRA REAMLETAAI PGELSRLFPI CDPDGSDTAS FDETLELLHL
AGRKLPHAVL MMIPEAWENH TEMDPARRAF YEFHSTLLEA WDGPASITFS DGTLVGAVLD
RNGLRPGRFW VTRDGLVVLA SEAGVLDIAP QDVVRKGRLQ PGKMFLIDTE LGKIIEDDEI
KAELAAELPY AEWLHAGLVR FEELPARSRE IPTHEALIKR QQTFGYTEEE LRIILSPMAK
VGAEPIGSMG TDTPVAVLSE KPRLLFDYFS QLFAQVTNPP LDAIREELVT SLASTLGPEG
NLLDPGPASC RQLVLPYPVI DNDELAKIIH INDEGALPGF HPRVVSGLYE VRGGGEALLH
RLEEICAEVS AAIEGGARVI VLSDRGSSDV LAPIPSLLLT GAVHHHLIAE KTRTRVGLVI
ETGEAREAHH MALLVGYGAG AVNPYLAIET VEDMVDSGVL AIDKHKAVRN LIKAYGKGVL
KVMSKMGVST VASYTGAQIF EALGLGQDVI DACFTGTTSR LGGIGFDVLA QEVALRHGRA
YPRAENAHRR LEVGGEYQWR REGEPHLFNP ETVFKLQHAT RSRRYEIFKE YTGLVDSQAE
KLMTLRGLFK FRDGVREPVP IDEVEPVSEI VKRFSTGAMS YGSISMEAHE TLAIAMNRLG
GKSNTGEGGE DPERLYDPAR RSAIKQVASG RFGVTSEYLV NADDLQIKMA QGAKPGEGGQ
LPGHKVYPWI AKTRHSTPGV GLISPPPHHD IYSIEDLAQL IHDLKNSNPV ARVHVKLVAE
VGVGTVAAGV SKAHADVVLI SGHDGGTGAS PLTSLKHAGA PWELGLAETQ QTLLLNGLRD
RIVVQVDGQL KTGRDVVVAA LLGAEEYGFA TAPLVVSGCV MMRVCHLDTC PVGVATQNPE
LRKRFTGKPE FVINFFEFIA EEIREHLAAL GFRSLDEAIG HAELLDTTSA ENHWKAAGLD
LAPILHQPEL PEGTALRRTQ EQDHGLDKAL DHTLIQLAEG ALDHGRRVTL ELPIRNVNRT
VGTMLGHEVT RRYGGAGLPD DTIEVRFTGS AGNSFGAFVP RGVTLRLTGD ANDYLGKGLS
GGRITVQPHD EAPLEGHIIA GNVGLYGATS GEVFVRGVMG ERFCVRNSGA TAVVEGVGDH
GCEYMTGGKV VVLGPTGRNF AAGMSGGVAY LLDLNPARVN REMVEIESLD EAESETLREI
VEAHLTETGS TVAKALLTDW DPARFSKIMP TDYKRVLRAA EAARLEGRDI DEAVMTAAVQ
G
|
|---|
| |