| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2880 |
|---|
| Symbol | |
|---|
| ID | 8666166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 3131370 |
|---|
| End bp | 3134534 |
|---|
| Gene Length | 3165 bp |
|---|
| Protein Length | 1054 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_003338580 |
|---|
| Protein GI | 271964384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.648909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.857915 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCT ATTTCCGCTC TCTTCCCGCG CAGGTCGATC TACCCGCGCT CGAACATGAG
GTGCTCGACC GCTGGCGTGA CGGAAAGGTC TTCGAGCGCT CGGTCGAGCA GAACACCGAC
GGTCCCAACT GGGTCTTCTA CGAGGGCCCG CCCACCGCCA ACGGCATGCC CGGCGTCCAC
CACGTCGAGG CCCGGGTGTT CAAGGACGTC TTCCCCCGCT ACAAGTCGAT GCAGGGCTAC
AACGTGCCCC GCAAGGCCGG CTGGGACTGC CACGGCCTGC CGGTCGAGGT CGCCGTCGAG
AAGGAACTCG GCCTGTCCGG CAAGAAGGAC ATCGAGGAGT ACGGCGTCGC CGAGTTCAAC
GCCAGGTGCC GCGAGTCGGT GCTGCGGCAC GTGGACGCCT TCGAAGAGAT GACCGAGCGG
ATGGGCTACT GGATCGACCT GTCCCAGGCC TACCGCACGA TGGACCCGAG CTACGTGGAG
TCCGTCTGGT GGTCGCTCAA GGTCGTCTTC GACAAGGACC TGCTGTTCCG CGACTTCCGG
ATCACCCCCT ACTGCCCGCG CTGCGGCACC GGCCTGTCCG ACCACGAGCT GGGCCAGCCC
GGCGGCTACG AGACCGTCTC CAGCCCGTCG GTCTACGTCC GCATGCCCGC CACGTCGGGC
CCGCTGGCCG ACCTCGGCGC CTCGCTGCTG ATCTGGACCA CCACCCCGTG GACGCTGGTC
TCCAACACCG CCGTGGCCGT GCACCCCGAC GTGACCTACG TCGCGGCCCG CCCCGCCGGG
TCCGACGAGG TGCTGGTGGT CGCCGAGCCG CTGCTGGTCT CCGCGCTGGG CGAGGGCGCC
GAGGTGCTGG CCTCCTTCCA GGGCGCCGAC CTGGAGCACA CCACCTACTC CCGCCCCTTC
GAGCTGGTCG ACATCCCCGG CGCGCACTAC GTGGTGCTCG GCTACTACGT CACCACCGAG
GACGGCACCG GCCTGGTCCA CCAGGCCCCC GCCTTCGGCG CCGACGACCT GACGACCTGC
AAGCGGTACG GCCTGCCGGT GGTCAACCCC ATCGGCCCCG ACGGGCGCTT CCTCGACAGC
GTCCCCCAGG TCGGCGGGCA GTTCTTCAAG GACGCCGACG AGGACCTCAC CGAGGACCTC
AGGGCGCGCG GCCTGCTCTA CCGGGGCGGC CACTTCGAGC ACAGCTACCC GCACTGCTGG
CGCTGCCACA CCGCCCTGCT CTACTACGCG CTCCCCGCCT GGTACATCCG CACCACGGCG
ATCAAGGAGC AGCTCCTCGC CGAGAACGAG CAGACCAACT GGTACCCCGA GACGATCAAG
TGGGGCCGCT TCGGCGAGTG GCTGCGCAAC AACGTCGACT GGTCGCTGTC CCGGTCGCGT
TACTGGGGCA CGCCGCTGCC GCTGTGGGTC TGCTCCGCCG ACGAGTCGCA CATCACCTGC
GTCGGCTCGC TGGAGGAGCT GAGCCGGCTC TCCGGCCAGG ACGTGTCCGC CCTCGACCCG
CACCGTCCCT ACGTGGACGA CATCACGCTG CCCTGCCCCA CCTGCGGGGC CGAGGCGCGC
CGGGTGCCGG ACGTGATCGA CGCCTGGTAC GACTCGGGGT CGATGCCGTT CGCCCAGTGG
GGCGCGCCGT ACCAGAACGC GGACATGCTG GAGAAGGCCT ACCCGGCGCA GTTCATCTGC
GAGGCCACCG ACCAGACGCG CGGCTGGTTC TACTCGCTGA TGGCGGTCGG CACGCTGGTC
TTCGGCAGGT CCTCGTACGA GAACGTGCTC TGCCTCGGCC TGATCCTCGC CGAGGACGGC
CGCAAGATGA GCAAGCACCT GGGCAACGTG CTGCAGCCGA TCCCGCTGAT GGACCAGCAC
GGCGCCGACG CGCTGCGCTG GTACATGGCC TGCGCCGGCT CGCCGTGGGC GGCCCGCCGG
GTCGGGCACG GCGCCCTGGA GGAGATCGTC CGCAAGGTCC TGCTGACCTA CTGGAACACC
GCGTCGTTCT TCACCCTCTA CGCCAACGCC GAATCGTGGT CGCCGTCCAG GCTCTCCGAG
GCCCCCCCGC ACGCCGAGCG CCCGCTGATC GACCGCTGGG TGCTGGCCGA GCTGCACCGG
ACGGTGGCCG AGGTCACCGC GTCGATGGAC GAGTTCGACA CCGCCCGGGT CGGGCGGCGG
CTGGCGGAGT TCCTCGACGA CCTGTCCAAC TGGTACGTGC GGCGCTCCCG CCGCCGCTTC
TGGTCCGGTG ACGCCTCGGC GTTCGCCACG CTGTACGAGT GCCTGGAGAC CGTCACCCGG
CTGATGTCAC CGGTGGTGCC GTTCATCACC GACTACGTCT GGGACGTGCT GCGCGCCACC
GAGGCCCCCT CCTCCGTTCA CCTGGCCGCC TGGCCCTCGG TGACCGAGGA GCTGCTGGAC
CCCGCGCTGT CGGAGCAGAT GGCGCTGGTC CGCCGCCTGG TGGAGCTGGG CCGCTCGGCC
CGCGCCTCCA GCGGGGTCAA GACCCGCCAG CCGCTCGGCC GGGCACTGGT CGGCGCCCGC
GGCTGGGCCG CGCTCTCCCC CGAGCTGCGC GATCTGATCG CCGACGAGCT CAACGTCCAG
GGTCTGGAGG ACCTGTCGGG CATCGAGGCC GACCTGGTCT CCTTCACCGT CAAGCCCAAC
TTCCGGGCGC TGGGCAAGAG GTTCGGCTCG CAGACCAAGC TGGTCGCCGC GGCCGTCGCC
GCCGCCGACG CCGGGGAGCT CGCACGCGCC CTCCGCTCGG GTTCGGCGGT CGCGGTGGAC
GCCGGCGAGC TGGGCACGGT GGAGCTGAGC GGCGAGGAGG TGATCGTCAC CGAGCAGCCG
AAGTCCGGGT GGGCGGTGGA GACCGGGGCC GTCGACACCG GCACCGGCGA GACGGTCGCC
CTCGACCTGA CCATCACCGA CGAGCTGCGC CGCTCCGGGC TGGTCCGCGA CGTCATCCGC
CTGCTCCAGG ACGCCCGCAA GTCGACCGGC CTGTCCATCT CCGACCGGAT CGACGTGTGG
TGGTCCACCA CCGACGCCGA CCTGGCCGAG GCTCTGCGCA CCCAGGGTGG CACGGTGGCC
GGCGAGGTCC TCGCCGTCTC CCTCAGCGAG GGCTCCGGAG GCGACCTCCC GGCCCACCAC
GACGCCGACC TCGACCTGAC CTTCCAGCTC CGCCGTACCG TCTGA
|
|---|
| Protein sequence | MSAYFRSLPA QVDLPALEHE VLDRWRDGKV FERSVEQNTD GPNWVFYEGP PTANGMPGVH
HVEARVFKDV FPRYKSMQGY NVPRKAGWDC HGLPVEVAVE KELGLSGKKD IEEYGVAEFN
ARCRESVLRH VDAFEEMTER MGYWIDLSQA YRTMDPSYVE SVWWSLKVVF DKDLLFRDFR
ITPYCPRCGT GLSDHELGQP GGYETVSSPS VYVRMPATSG PLADLGASLL IWTTTPWTLV
SNTAVAVHPD VTYVAARPAG SDEVLVVAEP LLVSALGEGA EVLASFQGAD LEHTTYSRPF
ELVDIPGAHY VVLGYYVTTE DGTGLVHQAP AFGADDLTTC KRYGLPVVNP IGPDGRFLDS
VPQVGGQFFK DADEDLTEDL RARGLLYRGG HFEHSYPHCW RCHTALLYYA LPAWYIRTTA
IKEQLLAENE QTNWYPETIK WGRFGEWLRN NVDWSLSRSR YWGTPLPLWV CSADESHITC
VGSLEELSRL SGQDVSALDP HRPYVDDITL PCPTCGAEAR RVPDVIDAWY DSGSMPFAQW
GAPYQNADML EKAYPAQFIC EATDQTRGWF YSLMAVGTLV FGRSSYENVL CLGLILAEDG
RKMSKHLGNV LQPIPLMDQH GADALRWYMA CAGSPWAARR VGHGALEEIV RKVLLTYWNT
ASFFTLYANA ESWSPSRLSE APPHAERPLI DRWVLAELHR TVAEVTASMD EFDTARVGRR
LAEFLDDLSN WYVRRSRRRF WSGDASAFAT LYECLETVTR LMSPVVPFIT DYVWDVLRAT
EAPSSVHLAA WPSVTEELLD PALSEQMALV RRLVELGRSA RASSGVKTRQ PLGRALVGAR
GWAALSPELR DLIADELNVQ GLEDLSGIEA DLVSFTVKPN FRALGKRFGS QTKLVAAAVA
AADAGELARA LRSGSAVAVD AGELGTVELS GEEVIVTEQP KSGWAVETGA VDTGTGETVA
LDLTITDELR RSGLVRDVIR LLQDARKSTG LSISDRIDVW WSTTDADLAE ALRTQGGTVA
GEVLAVSLSE GSGGDLPAHH DADLDLTFQL RRTV
|
|---|
| |