Gene Sros_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2879 
Symbol 
ID8666165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3129002 
End bp3130900 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content77% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003338579 
Protein GI271964383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCTTA TCAGCGCCGG CTTGGTGGTC ACCGCCATCG TCCTGCTCAT CGCGGGGTTC 
GTGCTGGCCA AGCCATTTCT GGTCATGTGG TCGATCGCGG TCAGCGTTCT GTCCGCGGTC
TTCCTGGTGA TCGGGGCGCT GTTGCGCCGC CACGAGCTGT TCCCCGGCGG GCGCGCCGGG
GCGGCTCCGC TCCCTCCCGA GGGACCGGTT CCGGCCGGGC CGATGCCCGC GCCGCACATG
AGGCCGGATC AGCGCGTCCC CTCGGCTCCG CACCCGAGGG CGCCGCACGG CATGCCGCCG
GCGGCGACCG TCGCGTCTCA GCCCCGGCCG CGCCCGGTGG CCGGGCCGGC TCCCGCCGCG
AGGCAGGGCC TGCTGGACGC CGAGGCGATC GTCCTGGTGA TCCCCGGGCG CAAGCGGTAT
CACGTCGCCG GCTGTCGGCA GCTGGCCGGC AGGGATCATG AGGAGCTCAC TCACGAGGAG
GCGCGCGAGG AGGGCTTCAC GCCCTGCACC ACGTGCCTGC CCGAGTTCAC CGGCGGGATC
CAGCCGCAGG ACGCCCCCAT CGGCGCTCAG AAACCGGTCG CGCACCCGGC CCCCTCCCCG
GAGCCCGGCC CCTCCGGCGA CACCCGCGGG CCGGACGTCC ACGAGCCCAC CGCCCGCTTC
AGCCCGCCGT ACGGGCCCGT CACCACGGCC ACCCCGCAGG AGGCCGCGGC TCCGGTGACC
CGCCCCTACA TCCAGGGCCC GGCGGCTCCC CGGGAGCAGG CACGGCCGCA GGAACCGGCG
AGCCCGCCGC TCCGCGCCGC GGAGACCGCC GCCCGGACCT TCCCGATCCA GTCCCCGGAG
CCCGAGCCGG AGACGTCCGC CGACGCCGAG GCCACCAGCT GGTTCAGCCG GGACATGGTC
GCGTCGGCCG CCGCCCAGCC GGAGACCCCG GCAGAACCCG AGCCCTCCGA GCCCTCCAAG
TCTTCCGCAC CCTCCGAACC GGAGGACGGC ACCCCGGCCG AGCCGGAGCC CGTCACGCCC
GCCTCCACCG GGGCGGAGGC CCCCGCCGAA GCCGGCGGCC CGGCGGAGCC CGACCCCACC
GGGGCCGAGA CCTCGATCAT CCCCTCCCGG TCCCTGCCTT CCGGCGGGTC CGCGCCCTCC
GAGGTGGAGG AATCCGCAGA GTCCGAAGGC GGGTCCGAGC CCCGGGGCGG CGCCCCGGCC
GGCTCCCGGC CCGCCGGTGC CGGCACCCCG GTAGGTGGCG AGGCTCCTGC CGCACCCTCC
GCGCCCGCCG CCGGGAGTCC GGCCACGTCC TCCGCGCCCG CCGGTGCCGG GAGCCCGGTC
AGGGGCGAGG CTCCTGTCGC GTCCTCCGCG TCCGATCCCG CGTCCTCCGA GCCTTCCAAG
GCCGATCCCG AGCCTTCCAA GGCCGATCCC GCGTCCTCCG AGTCCTCCAA GGCCGATCCC
GAGCCTTCCG GGGCCGAGGG CACGGCCGGG CCCGGCAGCC CCGCCACGTC CGCCTCCGCC
GCGCAGGAGG CTCCCGAGGA GCCCTCCCCG GCGGCGCGGA AGGCCGCCGA CCGGTCCGCC
TCCGCGGAGC CGGACAGCCC CTCCGAGCCG GCGGAGCCGC AGGTCCCGGC GGCCGGGGAG
AAGGCCCCTG AGGCGGTGCC GGAGACGGCG CCGGAAGAGG CATCCGGCGC GGACGACGGA
GACACCGCCC CCCACGGCAT CCCCGCCGTC AAGGACAGCC CGGAGCCCGC CCTCGGCGGC
TCCGGAGCGG TCAAGGTCAT CGTCGGCACC CGCCGCTTCC ACAGCTCCGC CTGCCCGCTC
ATCAAGGGCA CGGACGGCAG CGGCATCGAG ACCATGACCC GGGCCGAGGC CGAGGAGGCC
GGCCTGAGCA GCTGCTCGGT CTGCCGCGAC CAGGGCTAG
 
Protein sequence
MILISAGLVV TAIVLLIAGF VLAKPFLVMW SIAVSVLSAV FLVIGALLRR HELFPGGRAG 
AAPLPPEGPV PAGPMPAPHM RPDQRVPSAP HPRAPHGMPP AATVASQPRP RPVAGPAPAA
RQGLLDAEAI VLVIPGRKRY HVAGCRQLAG RDHEELTHEE AREEGFTPCT TCLPEFTGGI
QPQDAPIGAQ KPVAHPAPSP EPGPSGDTRG PDVHEPTARF SPPYGPVTTA TPQEAAAPVT
RPYIQGPAAP REQARPQEPA SPPLRAAETA ARTFPIQSPE PEPETSADAE ATSWFSRDMV
ASAAAQPETP AEPEPSEPSK SSAPSEPEDG TPAEPEPVTP ASTGAEAPAE AGGPAEPDPT
GAETSIIPSR SLPSGGSAPS EVEESAESEG GSEPRGGAPA GSRPAGAGTP VGGEAPAAPS
APAAGSPATS SAPAGAGSPV RGEAPVASSA SDPASSEPSK ADPEPSKADP ASSESSKADP
EPSGAEGTAG PGSPATSASA AQEAPEEPSP AARKAADRSA SAEPDSPSEP AEPQVPAAGE
KAPEAVPETA PEEASGADDG DTAPHGIPAV KDSPEPALGG SGAVKVIVGT RRFHSSACPL
IKGTDGSGIE TMTRAEAEEA GLSSCSVCRD QG