Gene Sros_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2724 
Symbol 
ID8666010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2958272 
End bp2959729 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content70% 
IMG OID 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_003338432 
Protein GI271964236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.307434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGC GGGCGGCCGC CTCGAGGTGG CGGGTGCTGG TGTTGCTGGG CACGGCGTTC 
TTCATGACCA TCCTGGACGG CACCAGCCTG CTCACCGCCC TGCCGGCCAT CGAGCGGGAG
TTTCGGGCGC ACGGCACCGC CGTCCAGTGG GCGGTCACGG CCTACGCGCT GGCCTTTGCG
GGCCTGCTGC TGTTGTGCGG CCGCGCCGCG GATCTGCTCG GCCGCCGCAG GGTCTTCCTG
GCAGGAATGT CGCTGCGCGT GTTGGCCTCG TTGGGATGCG GGTTCGCCCC GACGGTCGAA
GCCCTGGTCG CAGCCCGCGC TTTGCAGGGT GTGTCGGCCG CCATCATCGC CCCCGCAGCC
TTGTCCATGG TGATGAACGC CTTCGCCGAA GGCAGCGAGC GGAACAGGGC ACTGGGAATC
TGGGGTGGGA TCGGAGGGTT CGGTGCCACC GCCGGGCTGC TGCTGGGCGG CCTGATCACC
GATACGCTCG GCTGGCAGTG GGTCTTCTGG ATCAACGTCC CGGTCGGGGT GGTGGTGCTG
GTCCTCGCGC CGGTGATGCT GATCGAGAGC CGGGACGAGG TGCGTGTCCG CTCCTTTGAC
CTGGCCGGGG CGCTGACGGT CACTTCGGCT CTCGTGCTGT TCGTCTACGC CATCACCGGC
GTCCCTGACG TCGGATGGTC CAGCCACCGG ATCCTCGGGC CGCTGGCGGG TGCGATGGCG
CTGACCGGCT TGTTTGTCGT GATCGAACGG CGGTCCAAGG CGCCGCTGGT GCCATTCGGG
GTCCTGCGGT CGCGTTCTCT GGTCGGCGGC GACCTCCTGC TTCTCGTCAC GGGCATGGCG
GTCGACGGCA TGCTCATCGT CCTCACCGCC CACGCGCAGT CGGTGCTCGG CTGGTCGCCC
GTGCGGTTCG GCCTCACGGC CGGGGTGATG ACCGTGGCGG CCGTCGTCGG CGCTCTGGTC
TGCCAGCGGG TTGTGACCAG GATCGGCGTG CGTCCGGTAG CGACCGTCGG CACTGCCCTG
CTCGGTGGAG CCTGCCTGCT GCTCACCAGG GTGGTGTCCG AGCACAGCTC GCCGGAACTG
CTGACTTTTG CCCTGTTGGT CTTCGGGGCG GGCATGGGCA CCGCCACCGT CTGTGCCCAG
ATCGCGGCGT TCACCGGTGT CGCCGAACGG CACTCCGGTC TGGCCGCCGG ACTCGCCGAT
ACCTGCTTCG CGGTTGGCAC CGCCCTCGGC GTAGCCATCG CCGGCAGCGT TGTCGCCGCG
CATGCACCCA CGTCTGGGAT AGCCGCGCCG CAGACGCTGG TTCCCGGTCA TCAGGCCGCG
TTCGGCGTGG TCGGCCTCGT CGCGGCACTG GGCCTGGTCA TCGCTCTGGC CATGCTCGGC
AAGCGATCGG CGCCGGTCAC CAAAGAGACC GCGGCGCCTC CCGTTGACCG GATCGTGACC
GACCGCATTC CCACCTGA
 
Protein sequence
MSPRAAASRW RVLVLLGTAF FMTILDGTSL LTALPAIERE FRAHGTAVQW AVTAYALAFA 
GLLLLCGRAA DLLGRRRVFL AGMSLRVLAS LGCGFAPTVE ALVAARALQG VSAAIIAPAA
LSMVMNAFAE GSERNRALGI WGGIGGFGAT AGLLLGGLIT DTLGWQWVFW INVPVGVVVL
VLAPVMLIES RDEVRVRSFD LAGALTVTSA LVLFVYAITG VPDVGWSSHR ILGPLAGAMA
LTGLFVVIER RSKAPLVPFG VLRSRSLVGG DLLLLVTGMA VDGMLIVLTA HAQSVLGWSP
VRFGLTAGVM TVAAVVGALV CQRVVTRIGV RPVATVGTAL LGGACLLLTR VVSEHSSPEL
LTFALLVFGA GMGTATVCAQ IAAFTGVAER HSGLAAGLAD TCFAVGTALG VAIAGSVVAA
HAPTSGIAAP QTLVPGHQAA FGVVGLVAAL GLVIALAMLG KRSAPVTKET AAPPVDRIVT
DRIPT