| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2638 |
|---|
| Symbol | |
|---|
| ID | 8665924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2872939 |
|---|
| End bp | 2873634 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003338348 |
|---|
| Protein GI | 271964152 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0006014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTGA CCAGATCCTT ACTGGCATGC GGCGCTGTGG CCGGCCCGCT GTTCATCGTT
CTGGTTCTGA TCCAGGACTA CACGCGTCCC GGCTTCGACC CCAGACGGCA GCCGCTCAGC
CTGCTGAGCT TGGGCGACCT CGGCTGGATT CAGATCGCCA ACTTCGTGGT CACCGGGCTG
CTGTACGTCG CGTTCGCAGT GGGGATGCGG CGCGTGCTGC ATCCCGGCCG CGGTGGAACG
TGGGGGCCAC TGCTGATGGG CGCTTTCGGA ACCGGTCTGG TCATCGCGGG GCTCTTCCGC
ACCGCCCCTG GGTGGGGCTA TCCGCAGGGA GCGCCGGCCG GCGTGCCCAC CGACGCCGGC
GTGAGCTACG TGTTGCACGG CGCCGGCTTC TCTGTGGTGC TGGTCTCGCT GATCGCGGCC
TGCTCCGTGT TCACCCGGCG GTTCGCCGCG CTGGGCGAAC GGCGATGGGC GGCCTCGTGT
GCGGTCACCG GGGTGGCCCT GCCGACGATC TACGCGCTGT CGGGCGTGCT GTCGGAGCGC
GGTGAGAACT CACAACCCCT GAGCCTCCTG CTCCGCCTCG TGGCCTTGGT GGGCTGGGGG
TGGGCTTCGC TCCTGGCGGT ACGGCTACGC CGGGAAATCG CGGCCGCATC GGACCGGGCG
GGCGGGGCGA CCGGCCTGTC ATCGAACGCG CGCTGA
|
|---|
| Protein sequence | MRLTRSLLAC GAVAGPLFIV LVLIQDYTRP GFDPRRQPLS LLSLGDLGWI QIANFVVTGL
LYVAFAVGMR RVLHPGRGGT WGPLLMGAFG TGLVIAGLFR TAPGWGYPQG APAGVPTDAG
VSYVLHGAGF SVVLVSLIAA CSVFTRRFAA LGERRWAASC AVTGVALPTI YALSGVLSER
GENSQPLSLL LRLVALVGWG WASLLAVRLR REIAAASDRA GGATGLSSNA R
|
|---|
| |