Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2637 |
Symbol | |
ID | 8665923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 2872213 |
End bp | 2872875 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003338347 |
Protein GI | 271964151 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000568428 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGA CCAAGCGCCC GGCACTCAGC AGGCACACCC TGATCGAAAC AGCGCTTCGC CTGGTCGACC AGGTCGGCCT CGACGGACTG ACCGTGCGCA GGCTCGCCAC CGAGCTGGGT GTGAAGTCCC CGGCGCTCTA CTGGCACATC CGCACCAAGC AGGAACTGCT CGACGCCATG GCCGACACGA TCATCCTGGC CGCCGGAATG GGCCCGCCCC GCGAAGGCCA GAGCTGGCAG GACTGGCTCA CCCGCCGAGC TCACGCCTAC CGGGCCTCGC TGCTCGCGCA CCGCGACGGT GCCCGCCTGG TCGCCAACGC GGCCGGGCTG AGCCCGGCGA CGATCCGGCT GTTCGACGAG GAGCTCACCG CGCTGGTCGG CTGCGGGTTC ACTCCGATAC TTGCGCTGCG CACGATCGGG AGCTGCACCA GCTACATCAA CGGCTTCGTC CTCCGGGAGC AGGCCGAGCG GCCAGAGAGC GCGGACGAGC CGTCACAGCG GCTCTCGGCG GTGGCCGCCC TGCTGGAGCG CGGAACTGAC GCCACCTTGC TCCTGGCGAT CCGCGAAGGC GGCAGCTCGC TCGGGGACGA AGCCTTCGAC CACGGCCTCC GCACCCTGAT CGACGGCACG GCCGCCGCGC TCCAGCGCTC CAGCGCCCCC TGA
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Protein sequence | MSETKRPALS RHTLIETALR LVDQVGLDGL TVRRLATELG VKSPALYWHI RTKQELLDAM ADTIILAAGM GPPREGQSWQ DWLTRRAHAY RASLLAHRDG ARLVANAAGL SPATIRLFDE ELTALVGCGF TPILALRTIG SCTSYINGFV LREQAERPES ADEPSQRLSA VAALLERGTD ATLLLAIREG GSSLGDEAFD HGLRTLIDGT AAALQRSSAP
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