Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2572 |
Symbol | |
ID | 8665858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2803034 |
End bp | 2805070 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | membrane protein-like protein |
Protein accession | YP_003338289 |
Protein GI | 271964093 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.886769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGGGC AGGGGCAGGC CGCCCAGGCC GAGCGGCGGA CGGAGACGGG CCGGACGGTG AAGCTCGTGC TCGCGGGCAT CGCCGCGGCC GTGGCCGGCC TGGTGATCGC CATGATCGCC GGAGGAACAG CGAGCCCGCG CATCATCCCC GGCCTGCCCG ACGAGGGCGC GCTCACCCGC TGGGGGCTGC CGCTGTCCAA GCTGGCGATG GACGTGGCGG GCGTGCTCAC CGTGGGTGTG CTGCTGGCCG CCACGGCCTT CCTCCCCAGC GACAAGGGCC TGCTCGGCAA GCCCGCCCTC GTCTACGTCA GGGCCGCCTC GTGGCTCGCG CTCGTCTGGG CGGGCGCGGC CGCCGCGACG ATGGTGTTCA GCCTGTCCGA CGCGCTCGGC CTGCCCGTCC TCGACGTGCT CGGCGGCAAC GAGCTCACCA GCTTCGCCAG CCAGGTCTCC CAGGGCATCT CGCTCACCCT GGTGGTGCTG TTCGGGGTGG CGATCGCGCT GTTCGCCCGC GGGGCGATCA CCGCCGGCGC CGCCGGCGGC CTGCTCCTGC TCGCCCTGAT CACGCTGCTG CCTCCCGCGC TGACCGGGCA CTCCGCCTCC TCGCCCAACC ACGACCTGGC GACCACCGGC GTCGCGGTGC ACCTGCTGGT CCTCGCGCTC TGGGTGGGCG GGCTCGCGGT GCTCTGCGGC CACGCGCTGC GCCGGCAGCC GCACCTGGCG GTCGCCGCCG CCCGGTTCTC CTCCATGGCG CTGTGGTGTT TCATCGGCGT GGGACTGTCG GGCCTGTTCA GCGTCCTGGC CCGGCTCACC TCGCTCTCGG AGCTCTTCAC CTCCGCCTAC GGCCTGCTGC TGCTGGCCAA GACCGCCGCG TTCGCGGTGC TCGGCGCCAT CGGCTGGTGG CACAGGAAGC GGACCCTGCC CCAGCTCGCC GCCGGCGGGC CGGGCACCTT CGTCCGGTTC GCCTCCTGCG AGATCCTCGT CATGTTCGCC ACCGTCGGGC TGGCCGTCGC GCTCTCCCGC ACCGCCCCGC CCCCGGCGGT GCTGCCGGCC GACCGCGCCT TCGAGCTGCT GGGCTACCCC ATGCCGCCGG AGATCTCGCC GGCCAACCTG GCCTCGCTGT GGTGGCTCGA CCTGTTCTCC GGCACCCTGA TCGCCCTGCT CGGCGGGCTC TACCTCGCCG GAGTCGTACG GCTCGCCCGC CGTGGCGACT CCTGGCCCGT GGGCCGCACC GTCGCCTGGT TCATCGGCGT GCTGATCCTG CTCATCGCCA CCCAGAGCGG TGTCTCCCGC TACGCCAAGG TGCTGTTCAG CGCCCACATG GCCGAGCACA TGACGCTGTC CATGCTGGTG CCGATCTTCC TGGTGCTCGG CGCCCCCGTC ACGCTGGCGC TGCGCGCGCT CAAGCCCGCC GCGCAGCGGG GCGACCGGGG GCCGCGCGAG TGGCTGACCA CGATCCTGCA CAGCAGGTTC GTCAGCTTCG TCTCCCATCC GGCGATCGCC ACCGCGATCT TCGTCGTCTC CACCTACGCG CTGTACTTCA CCCCGCTGTT CGCCGCCGCG ATGGAGGAGC ACCTCGGCCA CATCGCCATG ACGGTGCACT TCCTGATCAG CGGCTCCCTG TTCTTCTGGG TGATCATCGG AGTGGACCCG GCGCCGCACA AGCTGCCCCA CTACGCCAGG TTGATGCTCC TGTTCGTCAC GATGCCCTTC CACGCGTTCT TCGGCATCGC GCTGATGAGC ATGGGCACCG TGCTCGCCGG TGAGTGGTAC GACCAGCTCG GCCGGACCTG GGGCGTCTCC GCGCTCGCCG ACCAGCGGAC CGGTGGCGCC ATCGCCTGGG GCTTCGGTGA GATCCCGACG CTGATCGTGC TGATCGCACT CGCCTTCCAG TGGTGGCAGG ACGACGACCG CAAGGCCCGC CGCGCCGACC GCCGGGCCGA CGCCCTCGCG GCCCGCACCG GCGGCACCGG CGACGCCCAG CTCGACGCCT ACAACGACTA CCTGGCCGAG CTTGACAAGA GGGAGCGCGC AGAGTAG
|
Protein sequence | MSGQGQAAQA ERRTETGRTV KLVLAGIAAA VAGLVIAMIA GGTASPRIIP GLPDEGALTR WGLPLSKLAM DVAGVLTVGV LLAATAFLPS DKGLLGKPAL VYVRAASWLA LVWAGAAAAT MVFSLSDALG LPVLDVLGGN ELTSFASQVS QGISLTLVVL FGVAIALFAR GAITAGAAGG LLLLALITLL PPALTGHSAS SPNHDLATTG VAVHLLVLAL WVGGLAVLCG HALRRQPHLA VAAARFSSMA LWCFIGVGLS GLFSVLARLT SLSELFTSAY GLLLLAKTAA FAVLGAIGWW HRKRTLPQLA AGGPGTFVRF ASCEILVMFA TVGLAVALSR TAPPPAVLPA DRAFELLGYP MPPEISPANL ASLWWLDLFS GTLIALLGGL YLAGVVRLAR RGDSWPVGRT VAWFIGVLIL LIATQSGVSR YAKVLFSAHM AEHMTLSMLV PIFLVLGAPV TLALRALKPA AQRGDRGPRE WLTTILHSRF VSFVSHPAIA TAIFVVSTYA LYFTPLFAAA MEEHLGHIAM TVHFLISGSL FFWVIIGVDP APHKLPHYAR LMLLFVTMPF HAFFGIALMS MGTVLAGEWY DQLGRTWGVS ALADQRTGGA IAWGFGEIPT LIVLIALAFQ WWQDDDRKAR RADRRADALA ARTGGTGDAQ LDAYNDYLAE LDKRERAE
|
| |