Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2529 |
Symbol | |
ID | 8665815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 2760241 |
End bp | 2762298 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_003338248 |
Protein GI | 271964052 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.413249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.693617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCACG CGATCGGGGT CGACGTCGGC GGGACGTTCA CGGACGCGGT GCTCAGCGGG CCGGACGGGC GGATGTCCGT CGCCAAGTGC CTGAGCACCC ACGACGACCC CACCGACGGG ATCGTCACCG CGGTCACCGC GGTGCTGGGC CGTACCGACC CGTCGGCGGT GACCAGGGTC GTGCACGCCA CCACGCTGGC CACCAACGCG GTCCTGGAGC GCCGGGGCGT CCGGGTGGCC TACGTCACGA CCCTGGGCTT CCGCTCGGCG ATCCCCCTCG GCCGGTACGC CCGGGTGGAG GAGGACCGCT ACGACCTCCG CTTCGACCCG CCCGCCCCGC CGGTCGCGGC GGAGGACTGC TTCGAGGTGC CCGAGCGCGT GAACAGCCGC GGCGAGGTGC TGCGGCCACT GGACGAGGCG GCCGTGGTCC GGGTCGGCGA GGAGATCGCA CGGCGGGGCG TCACCGCGGT CGCCGTCTGC CTGCTGCACT CCTACGCCAA CCCGTCCCAC GAGCGGCGGA TCGCGGAGAT CCTCGGGGCT CTGGTCCCGA CCGTGGTGAT CTCCTCGGAG GTCTGGCCGG AGCTGCGCGA GTACGAGCGG GCGACCACGA CCATCATGTC CGCCTACGTC GGGCCGGTGA TGGCGGGATA CCTGCGGCGG CTGACCACGC GGCTGGCCGC CGTCGGGATC ACCGCCCCGG TGCACGTGAT GGACTCCGCC GGCGGCGTGA TGTCGGCCGA GCTGGCCGCG CGCCGGGCCG TGACCACGAT CGAGTCCGGG CCCGCGGCGG GGGTGCTGGC CGCGGCCGCG ACAGGGTATC CGGACGTGAT CTCCTTCGAC ATGGGCGGGA CGACGGCCAA GACCTGCGTG ATCAGGAACG GCACGCCGGA GATCACCCAC GAGTTCCACG TCGGCGGCAA GGGCAGCTTC GGCGGCCGCC GGGCCGGGAC CGGGGTGCCG GTCAAGACCC CCGCCATCGA CCTGGCCGAG GTGGGCGCCG GAGGGGGCAG CGTCGCGTGG GTGGACCCGG CCGGCGCCCT GCGGGTCGGA CCGAGGTCGG CGGGCTCCGA GCCCGGTCCG GCCTGTTACG GCCTGGGCGG CGAGGAGCCG ACGGTGACCG ACGCCAACCT GGTTCTCGGC TACCTCGACC CCGGCTCCTT CGCCGGGGGG ACGATGCCGC TGTCCCGGGA TCTCGCCGAG AAGGCCGTCG ACCGGCGCCT GGCCGGGCCG CTGGGGGTGT CCGGTGCCGA GGCCGCGCAC GCGGTTCACG AGATCGCCAA CGCCTCGATG GGGTCGGCCG TGCACGTGGT CACCGTGCAG CGCGGCATCG ACCCGGCCGG TTTCGTCATG GTCGCCTTCG GCGGCGCGGG ACCCATGCAC GCCGCCCGGG TCGCCTCCCG CTTCGGCATC TCCACCGTGG TCGTCCCGGC GTACTGCGGC GTCGGCTCGG CGGCCGGCCT GCTCTCCGGC GACCTGTCCA CCGACCGCGT CCTGTCCGCC CTGGACGCCG ACCCCGGACA GGTCTTCGCC TCCCTCGCCG CGGCGGCCGC CCGCGACCTC GGGGTGAGCA CGGACTCGCC CGGCGTGTCC GTCACGCGCT CGGCCGACAT GCGCTTCACC GGGCAGGCCC ACGACCTCAC CGTCCCGTGG ACCGACTCCC CCGCCGAGCT GGCCGGCCGC TTCTCCGCCC GCTACCTGCA GGTGTACGGC ATAGCCCAGG AGGGCCCCAC GGAGATCGTC GGCTACCGCG TCCGCGTCAC CCAGGCCGCC GCCCGCACTC CCCGCACCCC CGCCCCTCCC GGCCCGCCCG CTCCCGCCGG CCTCTCCGGC GCCGGTACGG CGGGCGGCGG GGCCGGGCAC CCCCGGAGGA GGCGGAGTGC CTACTTCCCC GAGACGGGCG GGTACGTGGA GGTGCCGGTG TTCACCCGGG CCGGCCTCGG AGAGGTCGCC GGGCCGGCGA TCGTCGAGGA CGCCGAGTCG ACGATCGTGG TGCCCCCCGG ATGGACGGCC CGGCTCGCGG AGACCATGAG CGTGATCCTC ACGGAGGCGG CCAGGTGA
|
Protein sequence | MSHAIGVDVG GTFTDAVLSG PDGRMSVAKC LSTHDDPTDG IVTAVTAVLG RTDPSAVTRV VHATTLATNA VLERRGVRVA YVTTLGFRSA IPLGRYARVE EDRYDLRFDP PAPPVAAEDC FEVPERVNSR GEVLRPLDEA AVVRVGEEIA RRGVTAVAVC LLHSYANPSH ERRIAEILGA LVPTVVISSE VWPELREYER ATTTIMSAYV GPVMAGYLRR LTTRLAAVGI TAPVHVMDSA GGVMSAELAA RRAVTTIESG PAAGVLAAAA TGYPDVISFD MGGTTAKTCV IRNGTPEITH EFHVGGKGSF GGRRAGTGVP VKTPAIDLAE VGAGGGSVAW VDPAGALRVG PRSAGSEPGP ACYGLGGEEP TVTDANLVLG YLDPGSFAGG TMPLSRDLAE KAVDRRLAGP LGVSGAEAAH AVHEIANASM GSAVHVVTVQ RGIDPAGFVM VAFGGAGPMH AARVASRFGI STVVVPAYCG VGSAAGLLSG DLSTDRVLSA LDADPGQVFA SLAAAAARDL GVSTDSPGVS VTRSADMRFT GQAHDLTVPW TDSPAELAGR FSARYLQVYG IAQEGPTEIV GYRVRVTQAA ARTPRTPAPP GPPAPAGLSG AGTAGGGAGH PRRRRSAYFP ETGGYVEVPV FTRAGLGEVA GPAIVEDAES TIVVPPGWTA RLAETMSVIL TEAAR
|
| |