| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2485 |
|---|
| Symbol | |
|---|
| ID | 8665771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 2709961 |
|---|
| End bp | 2711307 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | alpha-N-arabinofuranosidase |
|---|
| Protein accession | YP_003338204 |
|---|
| Protein GI | 271964008 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0107043 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCGACCA CCGCCCGTCT CACGCTGGAC CCCGCCTTCC GGATCGGCCC GGTGGACCCC
CGGCTCTTCG GCTCGTTCGT CGAGCACATG GGCCGCTGCG TCTACACCGG CGTCTTCGAG
CCCGGCCATC CCCTGGCCGA CGCCGACGGT TTCCGCACCG ACGTACTGGA GCTGACCCGC
GAGCTCGGGG TGACGCTGGT CCGTTACCCC GGAGGCAACT TCGTCTCCAA CTACCGCTGG
GAGGACGGCG TCGGCCCGGT GGAGGACCGG CCGGCCCGGC TGGAACTGGC CTGGCGGAGC
CTGGAGGGCA ACAGCTTCGG GCTCAACGAG TTCATGGCCT GGGCCGCCAA GGCCGGGGTG
GAGCCGATGA TGGCGCTCAA CCTGGGCACC CGCGGCGTGG CCGAGGCGCT GGAGCTGGTG
GAGTACGCCA ACTATCCCGG GGGCACGCGC CTGTCCGAGC TGCGCCGCGC GCACGGCGCC
GACAAGCCGC ACGACGTGCG GCTGTGGTGC CTGGGCAACG AGCTGGACGG CCCCTGGCAG
ATGGGCCACA AGACCGCCGG GGAGTACGGC CGGCTCGCCG CCGAGACGGC GCGGGCGCTC
AAACGCTTCG ACCAGGGGCT GTCCCTGGTG GCCTGCGGCA GTTCCAACAG CGGCATGCCG
ACGTTCGGCG CGTGGGAGGC GGAGGTCCTG GAGGCGACCT ACGAGATGGT CGACTACGTC
TCGCTGCACG CCTACTACGA TCCGTCCGAC GGTGACGTCG ACTCCTTCCT GGCCAGCGGC
GCCGACATGG AGCACATGAT CCGTTCGATC GCCGCCACCG CCGACCACGT GGGCGCGAAG
CTGCGCAGCG ACAAGAAGAT CAAGCTCTCC TTCGACGAGT GGAACGTCTG GTACCAGAGC
CGTTTCAACG GAGAGTCCTC GCTGGAGTGG ACCGAGCACC CCCGGCTGAT CGAGGACTCC
TACGACGTCA CCGACGCGGT GGTGGTCGGC AGCCTGCTCA TCACCCTGCT GCGCAACGCC
GACCGGGTCG GCGTCGCCTG CCAGGCGCAG CTGGCCAACG TGATCGCCCC GATCAGGACG
GAGCCCGGCG GCCCCGCCTG GCGGCAGACC ATCTTCCATC CGTTCGCGCT GACCGCCAGG
CACGCCCGCG GCGAGGTGCT CCGGGTGGAG CCCGAGTGCG CCACGATCCC CACCGCCAAG
TACGGCGAGG CCCCCGCGAT CTGGGCGACC GCCACCCACG ACGCGGCGAC CGGCGCGGTG
ATCGCCAGTC TGCCGGTGAT CGTGCTCTAC CTCGTCGCCC AGCGCTGGGT GATCGAGGGA
ATCTCCCGCT CGGGGCTCAA GGGATGA
|
|---|
| Protein sequence | MATTARLTLD PAFRIGPVDP RLFGSFVEHM GRCVYTGVFE PGHPLADADG FRTDVLELTR
ELGVTLVRYP GGNFVSNYRW EDGVGPVEDR PARLELAWRS LEGNSFGLNE FMAWAAKAGV
EPMMALNLGT RGVAEALELV EYANYPGGTR LSELRRAHGA DKPHDVRLWC LGNELDGPWQ
MGHKTAGEYG RLAAETARAL KRFDQGLSLV ACGSSNSGMP TFGAWEAEVL EATYEMVDYV
SLHAYYDPSD GDVDSFLASG ADMEHMIRSI AATADHVGAK LRSDKKIKLS FDEWNVWYQS
RFNGESSLEW TEHPRLIEDS YDVTDAVVVG SLLITLLRNA DRVGVACQAQ LANVIAPIRT
EPGGPAWRQT IFHPFALTAR HARGEVLRVE PECATIPTAK YGEAPAIWAT ATHDAATGAV
IASLPVIVLY LVAQRWVIEG ISRSGLKG
|
|---|
| |