Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2459 |
Symbol | |
ID | 8665745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2684424 |
End bp | 2685620 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | putative lipopolysaccharide heptosyltransferase, glycosyl transferase, family 9 |
Protein accession | YP_003338178 |
Protein GI | 271963982 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.262404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.245391 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGGCA CCGTCCTCGT CGCCCGGCCG GACAGCGCGG GCGGCGTCCT GCTGGCCGGG CCCGCCGTCC GCGCGGTCGC CGCGGGAGCC AGGGAGGTCG TGCTGCTGGC CGGGCCGCAC GGCCGGGCGG CCGCCGAGCT GCTGCCCGGC GTGTCCAGGG TGGTGGAGTG GCGGACGCCG TGGATCGACC CCAACCCGCC GCCCATGACC GGCCCGCACG CCCTGCGGCT GCTGCGGACC GTTCAGGAGG TGGCGCCCGA ACTGGCGCTG ATCCTCACCT CCTTCCACCA GTCGCCGCTG CCGCTGGCCC TGCTGCTGAG ACTGGCAGGG ACGCCGAAGA CCGCCGCCAT CTGCGCCGAC TACCCCGGCT CGCTGCTCGA CGTGTGCCAC GTCGTCGACG AGGAGCCGGA CGTGCCGGAG GCCGAGCGCA TGCTCGGGCT GGCCAGGGCC GCGGGGTTCG AGCTGCCGCC CGGCGACGCG GGAGCGCTCG CCGTACGGCG CCCGCTGCCC GAGGTCGGGC ACCTGACAGG GCCGCCCGGC TACGTGGTCG TGCACCCCGG GGTCTCCGCC CCGGTCAGGG CGTGGCCCGC GGAGAGCTGG ACGAGGGCGG TCCACGACCT CGTCCGCGCG GGCTGGCGGG TCGTGGTGAC CGGCGGTCCG GGCGAGCGCG CGCTCACCGC ACGGGTGGCC GGCGCGCGAC GGTCCGGCCT CTCCGGCCGG CCCGCCGTAC CGGACGGGTG GGCGGGCAGG GCGCCCGTCC TGGGCCCCGC GCAGGAGACG CGCCTCCCGC ACGGGGCCGT CCAGGAGGCG TGCTCCGCGC CGGGGCCGGG GCCGGAGACG GGAGACGGGC CCGCCTGGGA ATCCGTCACG GACCTGGGCG GGAGGACGAC TTTCGCCGAA CTGGCGGCGG TGCTCGCCGG GGCGAGCGTG GTGGTCGCGG CCAACACCGG TCCCGCCCAT CTCGCGGCGG CGGTCGGCAC ACCTGTGGTC AGCCTCTTCG CCCCCGTGGT CCCGGCCGCC CGCTGGGCGC CGTACGGCGT GCCGAGCGTG GTGCTGGGCG ACCAGAACGC CGCCTGCCGG GGCAGCCGGG CCAGGTTGTG CCCGATCGCC GGCCATCCCT GCCTGTCGTC CGTGCCGAGC GCCGACGTCG TCGAGGCCGT CAACCGCCTG GCGTTCGCGA AGGAGGCCGT CCCTTGA
|
Protein sequence | MIGTVLVARP DSAGGVLLAG PAVRAVAAGA REVVLLAGPH GRAAAELLPG VSRVVEWRTP WIDPNPPPMT GPHALRLLRT VQEVAPELAL ILTSFHQSPL PLALLLRLAG TPKTAAICAD YPGSLLDVCH VVDEEPDVPE AERMLGLARA AGFELPPGDA GALAVRRPLP EVGHLTGPPG YVVVHPGVSA PVRAWPAESW TRAVHDLVRA GWRVVVTGGP GERALTARVA GARRSGLSGR PAVPDGWAGR APVLGPAQET RLPHGAVQEA CSAPGPGPET GDGPAWESVT DLGGRTTFAE LAAVLAGASV VVAANTGPAH LAAAVGTPVV SLFAPVVPAA RWAPYGVPSV VLGDQNAACR GSRARLCPIA GHPCLSSVPS ADVVEAVNRL AFAKEAVP
|
| |