Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2438 |
Symbol | |
ID | 8665724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2660446 |
End bp | 2662308 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | Serine/threonine protein kinase-like protein |
Protein accession | YP_003338159 |
Protein GI | 271963963 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00115665 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCGGGGA TCGTGGGCGG TTGGGAACGG GCGCAGGCCG TGCTGGCCGG CCGGTATCGG CTGGATGAGC TGATCGGCCG GGGCGGTACG GGCGAGGTGT GGCGCGGTCA TGACCTGCGG CCGGGCTGGC CGGTGGCGGT CAAGATCCTG TCGCCGCAGG TGACCGACGT CTCGATGCGG GAGCGGTTCG CCCGGGAGGC GCGGACCGCC GCGCGGGTCG TCCACCCCAA TGTGGTGACG GTGTTCGACG TGGGCGAGCA CGAGGGCCGG CCGTTCCTGG TCATGGAGCT GCTGACCGGC CGCGACCTCG CCACCGAGCT GGCCGAGGAC GGCCCGCCGG GCATCTCCGC GATGTGCCGC CTGGCGGGGC AGGCCGCGGT CGGGCTGGAC GCCGCGCATC GGGCCGGGGT CGTGCACCGC GACGTCAAGC CGGCCAACCT GCACCGGAGC GGGGACGGCG CGCTCAAGGT GGTCGACTTC GGTACGGCCC GCGTCGCGAC CGAGGCCGCG ACGCGGCTGA CCTCCGGGGG AGACGTCGTC GGCACGGCCG CCTACCTGTC GCCCGAGCAG ATTCTCGGCG AGGCGGGGGA CGCGGCATCC GACCTGTACG CGCTCGGCTG CGTCTGCTAC GAGCTGCTGT GCGGGCGCCC GCCGTTCGTC GGACCGGCGG CGGACCTGAT CTCCCAGCAC GTGCGGAGCC TTCCGGAGCC ACCCCGCCGC CACCGCCCGG ACGTCCCGGT GGAGCTGGAG CGGCTGGTGC TGGCCCTGCT GGAGAAGGAC CCCGCCGCGC GGCCCCCCAG CGGGGAGGTC GTCCGCCGGG TGCTGGCCGG GGTCGCCCGC CAGGTGGCGC CCCGCGCCCG TGACGGCGCG GCGCCCCCTC CTCCGGAGCC CGAGCCGGGT CCGCCCGCGC GGGCCTGGAC CACGGAAGCT CCGTCCACGC GGGCCTGGAC CACGGAAGCT CCGTCCACGC GGGCCTGGAC CACGGAAGCT CCGTCCACGC GGGCCCGGAG CACGGAAGCT CCGTCCACGC GGGCCCGGAG CACGGAAGCT CCGTCCACGC GGGCCCGGAG CACGGAAGCT CTGAGCACGG AGGCTCGAAG CACGGAGGTC CGGAGCAGGG AAGTCCGGCG CGTGGATGCC CGGAGCACGG AAGCTCCGTC CACGCGGGCC TGGACGGCGG AGGCTCGGAG CACGGAAGCC GGGGCCGCGC GGGACTGGAC GGCGGAGGCG CGGAGCACGG AGGTGTGGGC GGCGGAGGCG TGGACGGCGC GGGCCCGTAC CGGGGAGGCC GCCCGGAGCG CGGAGTCCGT GCCGGGCCGC CTGCGGGGGT GGCACGTCGG GGCGGGGCTG GGCGTGCTCG CCGCCCTCGT GGCCGGAGCC CTGTGGACGT CGGCCCCGCC GGACCCGGCG GGATCGGCCG CCGCCGCGAT CACGTCCGCG GCGCCTTCCG CGACGCGGTC CGGGCCGTCC GGGCTGCCGT CCGCACCGCC GTCGCCGTCG CGGACCGCCT CGCAGAGCGT GTCCGCGGCC CCGTCACCGG CCCCCAGCCG GACCGCGGCG GCACAGGGAT GGCGGGCACG CCTGCTGGCC CTCAGCCGTG CCGTCACCGA GCAGGAACGC CGCGGGGGCA TCGACCGCAA GCTGGCCCGC AAGATCCGGG GGAAGATCGC CAAAATCGCC GGGAAGCTCC AGGAGGGCAA GGGCGGGGAC GCCCGTGACG AGCTGCGCGA GCTCGGCCGC GACCTGGCCG AGGCCCGGCG GAAGGGCAGG CTCGCCTCCG AGGGGCCCCT CCTCACCTTC CTGCGCGACT CCGGGTTCGC CCTCGCCTCC CCGCCGCGCG GCCGCGGTTC CGACGACGAC TAG
|
Protein sequence | MAGIVGGWER AQAVLAGRYR LDELIGRGGT GEVWRGHDLR PGWPVAVKIL SPQVTDVSMR ERFAREARTA ARVVHPNVVT VFDVGEHEGR PFLVMELLTG RDLATELAED GPPGISAMCR LAGQAAVGLD AAHRAGVVHR DVKPANLHRS GDGALKVVDF GTARVATEAA TRLTSGGDVV GTAAYLSPEQ ILGEAGDAAS DLYALGCVCY ELLCGRPPFV GPAADLISQH VRSLPEPPRR HRPDVPVELE RLVLALLEKD PAARPPSGEV VRRVLAGVAR QVAPRARDGA APPPPEPEPG PPARAWTTEA PSTRAWTTEA PSTRAWTTEA PSTRARSTEA PSTRARSTEA PSTRARSTEA LSTEARSTEV RSREVRRVDA RSTEAPSTRA WTAEARSTEA GAARDWTAEA RSTEVWAAEA WTARARTGEA ARSAESVPGR LRGWHVGAGL GVLAALVAGA LWTSAPPDPA GSAAAAITSA APSATRSGPS GLPSAPPSPS RTASQSVSAA PSPAPSRTAA AQGWRARLLA LSRAVTEQER RGGIDRKLAR KIRGKIAKIA GKLQEGKGGD ARDELRELGR DLAEARRKGR LASEGPLLTF LRDSGFALAS PPRGRGSDDD
|
| |