| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2431 |
|---|
| Symbol | |
|---|
| ID | 8665717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 2650037 |
|---|
| End bp | 2651287 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | D-amino-acid dehydrogenase |
|---|
| Protein accession | YP_003338152 |
|---|
| Protein GI | 271963956 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0276149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATCG ATGGTGGGCC GCGTACGGCA GTGGTGATCG GCGCCGGCGT GGTGGGGCTG
TCCACCGCCT GGTTCCTGCA GGAACGCGGT GTGGACGTCA CCGTGGTCGA CCGTGACGGG
GTGGCCGCGG GCGCGTCGTG GGGCAACGCG GGCTGGCTCT CGCCGGGGCT GGCCATCCCG
CTGAACGAGC CCGGGGTCCT CCGTTACGGC CTGCGCTCCA TGCTCGACCG CAGTGCCCCG
CTGCACGTGC CGGCCACCCC CGACATCGGC CTGTGGTCCT TCCTCACCCG TTTCGCGGTG
CACTGCAACT GGAAGTCCTG GGGCCGGGCC GTGCGGGCCA ACCTCCCGTT CAACGAGGAG
TGCCTGGAAG CGTTCGACGT GCTCACCGCC AACGGCGTCG ACGCCCCCAC GGTCGAGGCC
CCGATCATGG CCGCGTTCGA GAACCCGAAG CAGGCCCTGG GACTCCTGCA CGAGCTGGAG
CGGATCAACG ACTCCGGGCA GGAGATCCGC TACACCGCGT TCGAGGGCGA CGACCTCGGC
AAGCAGGCGC CGCAACTCTC CCCCCGCGCC AGGGCCGGGA TCCGGCTGGA CGGGCAGCGC
CACGTCGACC CCGGGGAGTT CACCCGGTCG CTGGCCCGCG CCGTCGTCGC CCGCGGCGGC
ACGATCCGCT CCGGCTTCCG GGTGACCGGG GTGCACGACG ACTCCGGCAG GCTCTCCGTC
CGGTCGGGCG CGGGAGACTC CGTCAGCGGC GACGCCGTCG TCCTGGCCAC CGGCGCCTGG
CTGAACGTGC TCGGCCGGGA GTGGGGCGTC CGCCAGCCGG TGCGCGCCGG ACGCGGCTAC
TCGTTCACCG TGCCGACCGA GGAGGCCGTG CCCGGGCCGA TCTACCTGCC CGCCGTACGG
GTGGCCTGCA CGCCGTACCA GGGCAAGCTG CGCGTCGCGG GGACGATGGA GTTCCGTGAC
GCCGACGCCC CCCTGGACCA GAGGCGCGTC GACGCGATCA TCGCGTCCGC CCGGCCGCTG
CTCACCGGCG TCTCCTGGGA GGAGCGCACC GACACCTGGG TCGGCCCGCG CCCCGTCACC
CCCGACGGCC GGCCTCTCAT CGGGGCCACC AAGGCCCCCG GAAGGTTCGT CGCCGGCGGG
CACGGCATGT GGGGGCTCAC CCACGGGCCG ATCACCGGGC GCATGCTCGC CGAGCAGATC
ACCACCGGCA AGCAGCCCGC GGCCCTGCGG GACTTCGATC CCACCCGCTG A
|
|---|
| Protein sequence | MGIDGGPRTA VVIGAGVVGL STAWFLQERG VDVTVVDRDG VAAGASWGNA GWLSPGLAIP
LNEPGVLRYG LRSMLDRSAP LHVPATPDIG LWSFLTRFAV HCNWKSWGRA VRANLPFNEE
CLEAFDVLTA NGVDAPTVEA PIMAAFENPK QALGLLHELE RINDSGQEIR YTAFEGDDLG
KQAPQLSPRA RAGIRLDGQR HVDPGEFTRS LARAVVARGG TIRSGFRVTG VHDDSGRLSV
RSGAGDSVSG DAVVLATGAW LNVLGREWGV RQPVRAGRGY SFTVPTEEAV PGPIYLPAVR
VACTPYQGKL RVAGTMEFRD ADAPLDQRRV DAIIASARPL LTGVSWEERT DTWVGPRPVT
PDGRPLIGAT KAPGRFVAGG HGMWGLTHGP ITGRMLAEQI TTGKQPAALR DFDPTR
|
|---|
| |