Gene Sros_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2382 
Symbol 
ID8665665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2575427 
End bp2577109 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content69% 
IMG OID 
Productpeptide ABC transporter 
Protein accessionYP_003338105 
Protein GI271963909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA AGTCACTCAG ATCGTTCGAG TCGTTCAAGT TGTTCAAGGA GAAGCACGTG 
AAGCTGCGAT GGGGCGCCCT GACACTGGCC GGAGTGCTGG CGCTCACGGC GTGCGGAGCC
GAGACGGAGG CCCCCGCAGC CGCGGCCGGC GATGGCGGCG GCGGGTCGCT GGTGTGGGCG
GTGGAGACGC AGCCCATCAC GTTCAACCCG CAACTGTGGG GCCAGAACAA GGCCCGGCTG
CTGGTGCACA ACCAGTTCGA CGCGTTGATC GCCCGGGGGA GGAACGGCGA GTTCCTGCCG
TGGCTGGCCA CGTCCTGGGA GGTCTCCGAG GACGGCCTGA CCTACACCTT CCGGCTCCGC
GACGACGTCA CCTTCCACGA CGGCGAGAAG TTCGACGCCG CGTCGGTGAA GGCCAACCTC
GACCAGTTCG TCGTGCCGGG CTACAACCCG GCGGTGGCCG CCATCCAGCT CCGCAACTTC
GGCAAGGCCG AGGTGGCGGA CACGCACACC CTCAAGATCA CGCTGAAGGC GCCGGACGGC
CTGTTCCTGG ACTTCCTGTC CTCCCCCTAC GCCGGCCAGG TCTCCCCGAA GTCGCTGAAG
AACGCCAAGG ACCTCAAGGC CGGCGGGACC GACCTCGTCG GCACCGGGCC GTTCATCCTC
GACCGGTTCA CCCCGGGCCA GGAGGTCCAC TACAAGCGCA ACCCGGCCTA CAACTGGCCG
CCCGCGGGCT CGGCCCACCA AGGCCCGGCG CACCTGTCGG AGGTGACCTA CCGCTTCCTG
CCCGAGGCGG CGGTCCGGGT CGGCGCGCTC ACCTCGGGCC AGGTCCAGGT GATCGAGGGC
GTGCCCGCCA CGGAGATCGG CCTGATCAAG GGCGACCCCC AGCTGAAGCT GGAGACCAAC
CTCAACTCCG GCAGCGCGTT CTCCTACTAC TTCAACCAGT CGCACGCGCC GTTCGACGAC
AAGCGGGTGC GCGAGGCCTT CCGGGACGCC GTCGACGTGG ACGCGGTCCT CAACTCGGTC
TACCAGGGCA CGGCGAAGCG GGCCTGGAGC ATCATCGGCC AGGGCAGCCC GCAGTTCTAC
GACGCCTCGC TGGAGAAGAC CTTCGGCAAC AACCCGCAGC GGGCCAACAA GCTGCTCGAC
GACGCGGGCT GGGACAAGCG CGACAGCGAG GGTTTCCGGG TCAAGGACGG CAAGCGGCTG
ATCGTGCGGG CCGTGAACTC CGCCCCGTTC GTCCGGGACC GCCGCGACGT CCTCGCCCAG
GCGATCCAGG CGGCGGTCAA GCAGAGCGCC GGCATCGACT TCCAGGTCAA GCTGGTCGAC
CAGGGCACCG CGCAGAAGGC CTACGACGAC AACCAGTTCG ACGTCTTCGA GAACTCGCGC
GGCGACACCG ACGCCGGAGC CGCGCTCAAC CTGATCCTGC CGAAGGGGGC CGCGATCAAC
CGCACCCACT TCGAGAGCGC CGAGCTGGAC AAGCTGCTCG CCGAGGCGTC GGCCAGCTCC
GACGTCGCCG AGCGCAAGGA GCTCTACGCC AAGGTGCAGA AGCTCGTCGC CGACGAGGCC
CTGCTGCTCC CGCTCTACGT GCCCGCCGAC CAGATCGCCC ACAGCGCCGA CGTCACCGGG
ATCACCTTCG AGCCGGTCTC CGGCACCCCC AACAGTGCTT ATGACATCCG GACAGGGACA
TGA
 
Protein sequence
MARKSLRSFE SFKLFKEKHV KLRWGALTLA GVLALTACGA ETEAPAAAAG DGGGGSLVWA 
VETQPITFNP QLWGQNKARL LVHNQFDALI ARGRNGEFLP WLATSWEVSE DGLTYTFRLR
DDVTFHDGEK FDAASVKANL DQFVVPGYNP AVAAIQLRNF GKAEVADTHT LKITLKAPDG
LFLDFLSSPY AGQVSPKSLK NAKDLKAGGT DLVGTGPFIL DRFTPGQEVH YKRNPAYNWP
PAGSAHQGPA HLSEVTYRFL PEAAVRVGAL TSGQVQVIEG VPATEIGLIK GDPQLKLETN
LNSGSAFSYY FNQSHAPFDD KRVREAFRDA VDVDAVLNSV YQGTAKRAWS IIGQGSPQFY
DASLEKTFGN NPQRANKLLD DAGWDKRDSE GFRVKDGKRL IVRAVNSAPF VRDRRDVLAQ
AIQAAVKQSA GIDFQVKLVD QGTAQKAYDD NQFDVFENSR GDTDAGAALN LILPKGAAIN
RTHFESAELD KLLAEASASS DVAERKELYA KVQKLVADEA LLLPLYVPAD QIAHSADVTG
ITFEPVSGTP NSAYDIRTGT