| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2313 |
|---|
| Symbol | |
|---|
| ID | 8665595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2498780 |
|---|
| End bp | 2500063 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | sorbitol oxidase |
|---|
| Protein accession | YP_003338037 |
|---|
| Protein GI | 271963841 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGAC GGCAGACGAA CTGGGCGGGC AACGTCACCT ACGGCGCGGC GCGGCTCCAC
CGTCCCGACA GCGTCGAGCG GCTGCGGGAG GTGGTCGCCG GCAGCGGCAG CCTGCGAGCG
CTCGGCACCC GCCACTCCTT CAACCACATC GCCGACTGCC CCGGCGGGGA CCTCGTCTCG
CTGGAGAACC TTCCGGCCTC GATGGAACTG GACACCGTAC ACCGCACGGT CATGGTGGGG
GCAGGGGTCC GGTACGGCGA GCTGGCCCGG TGGCTGCACG GCCGGGGCTA CGCCCTGCAC
AACCTCGGCT CGCTGCCGCA CATCTCGGTC GCCGGTGCCT GCGCCACGGC CACGCACGGT
TCGGGCGACT CCAACGGGAA CCTGGCGACG GCGGTGGCGG GCATCGAGCT GGTCACCGCC
GACGGTGAGA TCACCGTCCT CACCCGGGAG CGGGACGGCG ACCGCTTCCG CGGAGCGGTG
GTCGCGCTCG GCGCGCTGGG GATCGTCACC CGGATCACTC TCGACGTCGT CCCGGCGTTC
GACGTGCGGC AGGACGTGTA CGAGAACCTC CCGTGGGAGC GGCTGGAGGA TCACTTCGAG
GACGTCTTCT CCGCCGCGTA CAGCGTGAGC CTGTTCACCG ACTGGCGGAG CTCGCAGATC
AACCAGGTGT GGCTGAAGCG GCGTACCGAC GGGCCGGACC CCTGGGAGGC GGAGCCGGAA
TGGCTGGGAG CCACCCTGGC GACGACCGAT CTGCACCCCC TGCCGGGCCT GCCGGCGGTC
AACTGCACCC GGCAGACGGG CGTGCCCGGC CCATGGCACG AGCGGTTGCC GCACTTCCGC
CTGGACTTCA TGCCCAGCAG CGGGGAGGAG CTGCAGTCCG AATACCTGCT GCCGCGTCAG
CACGCGATCG GCGCGCTCCG CGCCCTGGAC CGGATGAGAG ACAGCGTGGC CTCCGTCCTG
CAGGTGTCGG AGATCCGGAC CGTCGCGGCG GACGATCTGT GGATGAGTCC CTGCCATCGC
CAGGAGACGG TCGCCATCCA CTTCACCTGG ACGAAGGACT GGCCGGCGGT GCGCAGGGTG
CTCGGCATGG TCGAGGAAGG GCTGGAGCCC TTCGGCGCAC GGCCTCACTG GGGCAAGCTC
TCCGTCATGC GCCCCGAACG TCTGGGCTCC CTGTATGAGC GGCTGCCGGA CTTCCGGCGG
CTGCTCGGCG CCCACGACCC GGAGGGCAGG TTCCGCAACG CGTTCGTGAA CGACCTCGTC
TTCGCCGGAG ACCGCCCCTC ATGA
|
|---|
| Protein sequence | MTGRQTNWAG NVTYGAARLH RPDSVERLRE VVAGSGSLRA LGTRHSFNHI ADCPGGDLVS
LENLPASMEL DTVHRTVMVG AGVRYGELAR WLHGRGYALH NLGSLPHISV AGACATATHG
SGDSNGNLAT AVAGIELVTA DGEITVLTRE RDGDRFRGAV VALGALGIVT RITLDVVPAF
DVRQDVYENL PWERLEDHFE DVFSAAYSVS LFTDWRSSQI NQVWLKRRTD GPDPWEAEPE
WLGATLATTD LHPLPGLPAV NCTRQTGVPG PWHERLPHFR LDFMPSSGEE LQSEYLLPRQ
HAIGALRALD RMRDSVASVL QVSEIRTVAA DDLWMSPCHR QETVAIHFTW TKDWPAVRRV
LGMVEEGLEP FGARPHWGKL SVMRPERLGS LYERLPDFRR LLGAHDPEGR FRNAFVNDLV
FAGDRPS
|
|---|
| |