Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2218 |
Symbol | |
ID | 8665500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2397519 |
End bp | 2399027 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
Protein accession | YP_003337943 |
Protein GI | 271963747 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.173507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGTC CCTCCCCCGA GCAGGAGGCC GAGATCCAGG CCGCGCTGGA GGAGGCCAGG CTTGAGGCCG CCGAGATCCG CACCAGGGCC CAGCATGACG CCGAAGAGGT CCTGCGCAGG TCCGAGGCGG CCGTCGATGC CGCCGCCGAG CTGCGCAAGG AGGCAGAGGC GGAGAGCCGG GGGCTGAAGT ACGAGCTGAA GGAGCTCCGT TCCGACCTTG AGCGCCGGGA GAACCGGCTG GCCGAGCGGG AGCAGCGCCT CGACGAGGAG GCCAGGCGCC AGGCGGACCG GGCGCGCAAG CTCGCCGAGA CGGAGACCAA GCTCGCCGGC CGCCGTGAGG ATCTTGACCG GGTCGCCCAG GAGCGCAAGG TCATCCTGGA GCGGGTCTCC GGCCTCACCA GCGATCAGGC GCGGGCCGAG CTGGTCAGGG AGATCGAGAA CCAGGCCAAG CGCGAGGCCG CGCTGATCGT CAGGGAGATC GAGGGTGAGG CCCGCAGGGA GGGCGAGAAG CGGGCAACCA AGATCGTCAC GTTGGCGGTC CAGCGCGTTG CCACCGAGCA GACCGCCGAG TCCGTCGTCA GCGTCCTGCA TCTGCCCGGC GACGAGATGA AGGGCCGCAT CATCGGCCGC GAGGGCCGCA ACATCCGCGC CTTCGAATCG ACCACCGGGG TCAACCTGAT CATCGACGAC ACGCCCGAGG CGGTGCTTCT GTCATGTTTC GACCCGGTCC GCCGTGAGAC CGCCCGGCTG ACGCTGGAGA AGCTCGTCCT CGACGGCCGC ATCCACCCCC AGCGCATCGA GGAGGCGCAC GAGCGCAGCA AGGTCGAGGT CCAGGAGCTG TGCGTGCGTG CCGGCGAGGA CGCCCTGGTG GAGCTCGGCA TCACCGAGAT GCATCCCGAG CTGATCACAC TGCTCGGCCA GCTCCGCTAC CGCACCTCCT ACGGTCAGAA CGTGCTCGGC CACCTCGTGG AGTCTGCCCA CATCGCCGGG ATCATGGCGG CCGAGCTGCG GCTCGACCCG ATGCTGCTCA AGCGCTGCAC GGTCCTGCAC GACATCGGCA AGGCCCTCAC CCACGAGGTC GAGGGCAGCC ACGCCCTCAT CGGCGCCGAG ATCGCCAGGC GGTACGGCGA GCACGAGGAC GTCGTCCACG CGATCGAGGC CCACCACAAC GAGGTCGAGG TCAAGACCGT CGAAGCCGTC CTCACCCAGG CCGCCGACGC GATCAGCGGC GGCCGTCCGG GGGCCCGGCG CGAGTCGCTG GAGGCCTACG TCAAGCGGCT GGAGCGGCTG GAGGAGATCG CCACCTCCTA CGACGGCGTC GACAAGGTCT TCGCCATGCA GGCGGGCCGG GAGATCCGGG TCATGGTGAA ACCCGACTCG GTCGACGACA TCCAGGCCCA GGTGATCGCC CGCGACGTCG CCAAGCAGGT CGAGGAGGAG CTCACCTACC CCGGCCAGAT CCGCATCACC GTCGTCCGTG AGTCCAGGGC CACCGAGTTC GCGCGCTGA
|
Protein sequence | MTGPSPEQEA EIQAALEEAR LEAAEIRTRA QHDAEEVLRR SEAAVDAAAE LRKEAEAESR GLKYELKELR SDLERRENRL AEREQRLDEE ARRQADRARK LAETETKLAG RREDLDRVAQ ERKVILERVS GLTSDQARAE LVREIENQAK REAALIVREI EGEARREGEK RATKIVTLAV QRVATEQTAE SVVSVLHLPG DEMKGRIIGR EGRNIRAFES TTGVNLIIDD TPEAVLLSCF DPVRRETARL TLEKLVLDGR IHPQRIEEAH ERSKVEVQEL CVRAGEDALV ELGITEMHPE LITLLGQLRY RTSYGQNVLG HLVESAHIAG IMAAELRLDP MLLKRCTVLH DIGKALTHEV EGSHALIGAE IARRYGEHED VVHAIEAHHN EVEVKTVEAV LTQAADAISG GRPGARRESL EAYVKRLERL EEIATSYDGV DKVFAMQAGR EIRVMVKPDS VDDIQAQVIA RDVAKQVEEE LTYPGQIRIT VVRESRATEF AR
|
| |