| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_2196 |
|---|
| Symbol | |
|---|
| ID | 8665478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2362203 |
|---|
| End bp | 2362847 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | D-alanyl-D-alanine dipeptidase |
|---|
| Protein accession | YP_003337922 |
|---|
| Protein GI | 271963726 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.348263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACA TCGTTCTGAT CTCCGATCCC CGTGTCACCG CGATCCCCGT CGAGGAGTCC
GGAGAGCGGC TGGCCGACGT CCGGGGGCGG CTGCGGGTGG ACGGGCGGAT GGCCGATTCC
GAGGGGGCGT TCGCCCACCT GCGGGAGGGG CTGCTGGCCC GGCTGGAGGG CGCGCAGGCG
CAGCTCCCGC CCGGTTACCG GCTGCTGGTG GTGGAGGGCT ACCGGCCGCT GGCGACGCAG
CAGCGGATCT TCGAGGAGTA CTCGGCGGAG CTGCGGCTGG TGTTTCCGGA GATGTCGCCC
GAGGAGATCT GCGTGGCGGC GAGCCGCTAC GTCTCGCCTG TCGCGGTCGC CCCGCACACC
GCGGGCGCGG CAGTGGACCT GACCCTGTGC ACCGAGGACG GGGACGAGCT CGACATGGGC
ACCGCGCTCA ACGCCACCCC CGAGCAGAGT GACGGCGCCT GCTACACCGA CGCCTCCGGC
CTGTCGTCCG AGGCCCGCCA CCACCGCGGC ATGCTCGGCA CGGCCCTGCG GTCGGCCGGC
CTGGTCAACT ACCCCACCGA GTGGTGGCAC TGGTCCTACG GCGACCGCTA CTGGGCCATG
ACCACCGGGG CCGCGGCCGC CGTCTACGGC CCCACGTCGG TCTGA
|
|---|
| Protein sequence | MRDIVLISDP RVTAIPVEES GERLADVRGR LRVDGRMADS EGAFAHLREG LLARLEGAQA
QLPPGYRLLV VEGYRPLATQ QRIFEEYSAE LRLVFPEMSP EEICVAASRY VSPVAVAPHT
AGAAVDLTLC TEDGDELDMG TALNATPEQS DGACYTDASG LSSEARHHRG MLGTALRSAG
LVNYPTEWWH WSYGDRYWAM TTGAAAAVYG PTSV
|
|---|
| |