Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2165 |
Symbol | |
ID | 8665447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 2322870 |
End bp | 2323517 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003337891 |
Protein GI | 271963695 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.367605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.919137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCAACG AGCCTGGACT CCGCGAGCGG AAGAAGCTGC AGACCCGCAA ACTGATCTCA GATGTGGCCT CAGGCCTCTT CATGAGGCAC GGGTTCGACA ACGTCACGGT GGCCGAGGTG GCCGAGGCGG CCGGCGTCTC GACGAAGACG GTCTTCAACT ACTTCCCCCG GAAGGAGGAC CTCTTCCTCG ACCGGTTCCC CGAGGCCGCC GAGCTGATCA CCCAGGCGGT CCGGGAACGC CCCGAGGGCG AGGAGCCGCC GGCCGCGCTG CGCCGTCTGC TGCTGGACCT CCTGGAGCGG CGTCACCCCC TCGGGGGGAT CGGCGACGGC TACCAGTTCT TCTGGCAGGT CATCCTGGAC TCCCCGTCGC TGCAGGCACG GGCCAGGGAG CTGGTGGACG GGCTGGAGAA CCTGCTCGGC GTGCTGTTCG CCGAGGCCTC GAGGGCCGGT CCCGGCGATC CGTGGCCCCG GGTGGCGGCG GGGCTGGCCG TCTCGGCCTA CCGCACGACC TACATCATCA CCGCCCGGCG GATCCTCGCC GGCGAACGCT TCGATGACGT CATAGACGAC CACATCGCCC TGCTGAACCG TTCCTTCGAC GCCCTGGACC GGGCACTGGC CCCGGCCGAG GCCTCCCCGC CGGCGTGA
|
Protein sequence | MSNEPGLRER KKLQTRKLIS DVASGLFMRH GFDNVTVAEV AEAAGVSTKT VFNYFPRKED LFLDRFPEAA ELITQAVRER PEGEEPPAAL RRLLLDLLER RHPLGGIGDG YQFFWQVILD SPSLQARARE LVDGLENLLG VLFAEASRAG PGDPWPRVAA GLAVSAYRTT YIITARRILA GERFDDVIDD HIALLNRSFD ALDRALAPAE ASPPA
|
| |