Gene Sros_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2126 
Symbol 
ID8665408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2282664 
End bp2283632 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID 
Productpermease of oligopeptide ABC transporter 
Protein accessionYP_003337854 
Protein GI271963658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.689905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCT ACATCCTGCG GCGCTTCGGC GCCGCGGTGC TCGTCCTCTT CGCGATCAGC 
GTGCTGGTAT TCCTGATCTT CTTCGCCACT CCGGGCGTGG ACCCGGCGGC CCGCATCGCG
GGCAAGAACG CCGACCCGGC CACGCTGGAG CAGGTGCGCG CCTCGTTCGG CTTCGACCAG
CCGCTGCCCG TGCAGTACCT GATGATGATG AAGCACCTGT TCGTCAGCCA CGACCTCACC
TCGTTCGTGA ACCGGGGCAC GCTGGTCATC CCGCAGATCA TGGACGCGGT CCCGGTCACG
CTCTCGCTCG TCGTGGGCGC CGCGGTGATC TGGATGGTGC TGGGCGTGGC GATGGGCACT
CTCGCCGGAG CCATGCGCGG CACGCTGGTC GACCCGCTGG TCATGCTGCT CGGCGTCTTC
GGCGTCTCGC TGCCGGTCTA CTGGCTGGGC GAGGTGGTCA ACCTGATCAC CCAGAAGGAG
TTGCACGACT CGGTCTTCTC CTGGGTCCCG CCGCTCGGCT ACGTCCCGTT CTCGCAGAGC
CCGGGACAGT GGGCGCTGCA CCTGCTCCTG CCCTGGCTCA CCCTGGCCCT GCTGTACGCG
GGGATCTACG CCAGGCTGCT GCGCGGCGAG CTGATCCAGG CGCTGAACGA GGACTACGTG
CGCACCGCCC GCGCCAAGGG CCTGTCCGAA CGGCGCATCC TGATCAGGCA CGCCCTGCGC
TGCTCGCTGA TCCCGATCGT GTCGCTGTTC GGCCTGGACT TCGGCGCCCT CGTCGGCGGC
GCGGCGCTGC TCACCGAGGT GGTCTTCGGC CTGCCGGGCG TCGGCAAGCT CACCTACCAG
GCGCTGCAGA ACCTCGACCT GCCCGTGATC ATGGGCACGG TCCTCTACGC CGCCTTCTTC
GTCGTGCTGG CCAACGCCGT GGTGGACGTC CTGTACGCCC GGCTCGACCC GAGGGTGCGC
CGTGCCTGA
 
Protein sequence
MIGYILRRFG AAVLVLFAIS VLVFLIFFAT PGVDPAARIA GKNADPATLE QVRASFGFDQ 
PLPVQYLMMM KHLFVSHDLT SFVNRGTLVI PQIMDAVPVT LSLVVGAAVI WMVLGVAMGT
LAGAMRGTLV DPLVMLLGVF GVSLPVYWLG EVVNLITQKE LHDSVFSWVP PLGYVPFSQS
PGQWALHLLL PWLTLALLYA GIYARLLRGE LIQALNEDYV RTARAKGLSE RRILIRHALR
CSLIPIVSLF GLDFGALVGG AALLTEVVFG LPGVGKLTYQ ALQNLDLPVI MGTVLYAAFF
VVLANAVVDV LYARLDPRVR RA