Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2084 |
Symbol | |
ID | 8665366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2238567 |
End bp | 2239448 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter, permease |
Protein accession | YP_003337812 |
Protein GI | 271963616 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.395639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.741475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATCA CCCGGACCCG CCGCAAGGCG GCGTTCTCGC GCTTCTGGCG GGAGTACCGC AGGCAGCGGG CCGGACTGTA CGGCGCGGCG ATTCTCGTCG CGGCCGTCGT CCTGGCCCTC CTCACCCCGC TGATCACCGA CCCGGCCGGC ATGGACGTCA CCAAGGCGAC GGGCGCCAAG ATGTCCGCCC CGAGCCTGGA CTTCCCGATG GGCACCGACG AGTCGGGCCG CTCCATCCTG CTGATGGTCC TGTGGGGCTC GCGCGTCTCG CTGCTGATCG GCTTCATGTC GGCCCTGCTC AGCATGACCA TCGGCACGGT GATGGGCATC GCGGCGGGGC ACTTCCGCGG CTGGGTGTCG GCCGTGCTCA TGCGGATCAC CGACTGGTTC CTGGTCCTGC CGTCGCTCGT GCTGGCCCTG GTGCTCGCGG CCATCCTCGG CGGCGGCACC TCCACGATCA TCCTGGCGAT CGGGGTGACC TCCTGGGCGT CCACGGCGAG GCTGATCAGG GCGCAGACCC TGTCCGTCGA GGCCAGGCCG TACATCGAAC GCTCCAGAGC CCTCGGCGCG GGGCACTGGC ACATCATGAC CAGGCACGTG CTCCCGAACG TCGCCCCGCT GGTGCTGGCC AACACGACCC TGCAGGTGGC CAGCGCCATC GTCGCCGAGT CGACCCTGGC CTTTCTCGGC GCCGACTCGG GCGACGTCTC GTGGGGCGGC CTGCTGCGCG GCTCCTACGA CTGGGGCGCC GCCACCTCCG GCGCGTGGTG GTACGTCCTC GCGCCCGGCC TCTGCATCGT CGCGGTCGTC ATGGCGTTCA CGCTGTGCGG CCGGGCGCTG GAGGCCGTAC TCAACCCACG CCTGCGGGGG GTCTCCCGAT GA
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Protein sequence | MSITRTRRKA AFSRFWREYR RQRAGLYGAA ILVAAVVLAL LTPLITDPAG MDVTKATGAK MSAPSLDFPM GTDESGRSIL LMVLWGSRVS LLIGFMSALL SMTIGTVMGI AAGHFRGWVS AVLMRITDWF LVLPSLVLAL VLAAILGGGT STIILAIGVT SWASTARLIR AQTLSVEARP YIERSRALGA GHWHIMTRHV LPNVAPLVLA NTTLQVASAI VAESTLAFLG ADSGDVSWGG LLRGSYDWGA ATSGAWWYVL APGLCIVAVV MAFTLCGRAL EAVLNPRLRG VSR
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