Gene Sros_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2083 
Symbol 
ID8665365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2237506 
End bp2238570 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter, permease 
Protein accessionYP_003337811 
Protein GI271963615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.899813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.534674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTCC CTCCCGACAC CCTCTCCGAC CCCGAGCCCG CCGCCTTCCC GGCGGCGGGC 
CCCGGGAAGG AGCGCGGCGC CCACCGGCCG GTGCTGCGCT ACGCGCTGGC GAAGATCGGC
GGGGCCGCGC TCAGCATCGG CATGGTCATC GTCGCGACGT TCTTCCTGTT CCGGCTGATC
CCGGGTGATC CCGCGATCGC CTACACGCGC GACGTGCCGC TCAGCCCCGA ACAGCTCGAC
CTGCTCCGCC GCCAGATGGG GCTCGACAAG CCCCTGACGC AGCAGTTCCT CGACTTCGTG
ACGCGGACCC TCCGGCTGGA CCTCGGCACC TCCTACGAGT ACAAGCGCCC GGTCGCCGAG
CTCATCGCCG ACCGGGTGGG CCCCACCCTG GTGCTCGTGG GCACCGGGCT GGTCATCGCG
GTCAGCCTGG GCCTGTGGCA GGGCACGAGG GCGGCGTGGA ACCACGGGGG CCGGTTCGAC
CGCTTCTCCA CCGGCCTGTC GCTCGTCCTG TGGTCGGTGC CGACGTTCTG GCTGGGGCTG
CTGCTCCTGA TGGTCTTCGC CGCGGGGGTG GGGCCGATAC CGGGGATCTT CCCCACCCGG
GGCATGGAGG ACGTCGACGC GCCCGGCGGG CCGCTGTACC TCCTCCACGT CGCCCATCAC
CTGGTGCTGC CGTGCCTCAC CCTGGTCGCC GTGGTCTACG CGCAGTACCT GCTGGTCATG
CGCTCCTCGC TGCTCGACGA GATCGGCCAG GACTACGTGA CCACCGCCAG GGCGAAGGGA
CTGCGCGACG ACGAGGTACG GCGGCGCCAC GCCGTGCCCA ACGCGCTCCT GCCGACCGTC
ACGCTGGTCT TCATCCACAT CGGGTTCGTG GTGGGAGGAG CGGTGTCGGT GGAGACCGTC
TACTCCTGGC CGGGCCTCGG CCTGCTGTTC TACGAGGCGA TCAAGGGCCC CGACTTCGCG
GTCATGCAGG GGACGTTCAT GGTGGTGTGC ACCGCGGTGA TCGTCATGAA CACGCTGGCC
GACGTGGCCT ACCACGTCCT GGATCCGAGG GTGAGGTCGG CGTGA
 
Protein sequence
MTVPPDTLSD PEPAAFPAAG PGKERGAHRP VLRYALAKIG GAALSIGMVI VATFFLFRLI 
PGDPAIAYTR DVPLSPEQLD LLRRQMGLDK PLTQQFLDFV TRTLRLDLGT SYEYKRPVAE
LIADRVGPTL VLVGTGLVIA VSLGLWQGTR AAWNHGGRFD RFSTGLSLVL WSVPTFWLGL
LLLMVFAAGV GPIPGIFPTR GMEDVDAPGG PLYLLHVAHH LVLPCLTLVA VVYAQYLLVM
RSSLLDEIGQ DYVTTARAKG LRDDEVRRRH AVPNALLPTV TLVFIHIGFV VGGAVSVETV
YSWPGLGLLF YEAIKGPDFA VMQGTFMVVC TAVIVMNTLA DVAYHVLDPR VRSA