Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_2037 |
Symbol | |
ID | 8665319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 2189085 |
End bp | 2190503 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_003337765 |
Protein GI | 271963569 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00604433 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCA CGGATGTCCT GCGCGGGCTG TTCCTCTTCG AGAAACTCGA CGACGAGAAG CTGGAGTGGC TGGCCTCCCA CGGCGAGGAG CGGGAGTTCG GCGCCGGCGA GCTGATCGTG CGGCAGGGCG ACCCGGCCGA GTGTTTCCTC GTGCTCATCG ACGGCGAGAT CGTCATGTCC ACCGAGACCC CCGCCGGGGT GGTCACCATG ACCCCCACCT CCCAGCGCGG GGTCTACGCC GGAGCGACCT CCGCCTACCT GGGCGACCGG GCTCCGGACA CCTACTCCCA CTCGCTGCGC GCGACCAAGC CCTCGCGGCT CTTCGTGCTC CCGGCCAAGA AGTACGGCCT GATGATCGGC GAGTGGTTCC CGATGGCGGT CCACCTGCTC GACGGGGTGC GTCTCGGCGG GCTCGCCCAG CGGGAGATCA TCGACCGGCG GCAGCGGCTG ACCGCCCTCG GCACGATCAC TGCGGGGCTC ACCCACGAGC TCAACAACCC TGCGGCGGCG GCCGTACGGG CCGTGGGCGA GATGCGGGAG AAGGTCCGGT CGGCGCGGCG GCAGCTCGCC TCGCTGGCCG AGGCGGGCAT CTCGGCCGGA CGGCTGCGCG CGCTGATCGA CCTGCAGGAG GGCTGCACGG ACAAGGCCGC GAGCCTGCCC GCGCGGTCCC CGCTGGACAT CTCCGACGCC GAGGACGAGC TGGGCGACGA GCTGGAGGCG GCCGGGGTGT CGGACGGCTG GGAGCTCGCG CCGGCGCTGG TCGCCGCCGG GTTCAAGGCC GGCGGAGTGG AGAGGGTCCG CGACGCGGTC GGGGAGGAGC ACCTGTCCGG GGCGATGCAC TGGCTCGCCG AGGCCATCGA GATCAACCAG ATGCTGAACG AGGTGACCGA CGCGACCGAG CGCATCTCCT CGCTGCTCGC CTCCGCCAAG CAGTACTCCC AGATGGACCG CGCGCCGTAC CAGACCATAG ACGTCCGGGA GCTGCTGGAC AGCACGCTCA CCATGTTCCG GGGCAAGATC CCGCCCGGGA TCAGCCTGGC CACCGACTAC GACCCGGAGC TGCCGCCGAT CCCCGGCTAC GCCGGAGAGC TCAACCAGGT GTGGACCAAC CTGATCCACA ACGCGCTGGA CGCGATGGCC GGCACCGGCA CGCTGACCGT CCGCACCCGC CTGGAACACG ACACCACCGC CCTGATCGAG ATCTGCGACA CCGGCCCCGG CGTCCCCGAG CACCTGCGCG AGCGGATCTT CGAGCCGTTC TTCACCACCA AGTCCGTCGG CGAGGGCACC GGCCTGGGCC TGGACATCTC CTTCCGCATC GTCGCCGGCC GGCACGGCGG CGACCTGCGC GTGGAGTCGG TGCCGGGCGA CACCCGCTTC CAGGTACGGC TGCCGCTGGC CGAGCTCCCC AGCCCCTGA
|
Protein sequence | MTSTDVLRGL FLFEKLDDEK LEWLASHGEE REFGAGELIV RQGDPAECFL VLIDGEIVMS TETPAGVVTM TPTSQRGVYA GATSAYLGDR APDTYSHSLR ATKPSRLFVL PAKKYGLMIG EWFPMAVHLL DGVRLGGLAQ REIIDRRQRL TALGTITAGL THELNNPAAA AVRAVGEMRE KVRSARRQLA SLAEAGISAG RLRALIDLQE GCTDKAASLP ARSPLDISDA EDELGDELEA AGVSDGWELA PALVAAGFKA GGVERVRDAV GEEHLSGAMH WLAEAIEINQ MLNEVTDATE RISSLLASAK QYSQMDRAPY QTIDVRELLD STLTMFRGKI PPGISLATDY DPELPPIPGY AGELNQVWTN LIHNALDAMA GTGTLTVRTR LEHDTTALIE ICDTGPGVPE HLRERIFEPF FTTKSVGEGT GLGLDISFRI VAGRHGGDLR VESVPGDTRF QVRLPLAELP SP
|
| |