Gene Sros_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_2001 
Symbol 
ID8665283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2154313 
End bp2155101 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative short-chain alcohol dehydrogenase 
Protein accessionYP_003337732 
Protein GI271963536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.354016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGC GACTGACCGG CAAGACCGCT GTGGTGACCG GGGCCAGCCG GGGGATCGGG 
CTGGCGATCG TGGCCGCGCT CGCCGCCGAG GGGATGCGGG TGGTGGCCGG CGCGCGCACG
GCCTCGCCGG AGCTGAAGGA GACCGGCGCG ACCGCCGTAC CGGTGGACCT GTCCACCCCG
GACGGCCCGG CGCTGCTGGT CGCCGAGGCG CTGGCGGAGC TGGGCGAGAT CGACCTGCTC
GTCAACAACG TCGGCGGCGG CGACGGGGGC GAGGGGCAGC TGGGCGGATT CCTCGGCTTC
GACGACGAGG GGTGGCGGCA GGCGTTCGAC CTCAACTTCC TCAGCGCGGT CCGCACCACC
CGGGCGGCGC TGCCCAGCCT CCTGCGGAGC CGGGGGAGCA TCGTCAACAT CTCCTCCAAC
GGTGCCCGGC TGCCGCACGC GGGGCCCGTC GCCTACACCA CCGCGAAGGC GGCGCTGACC
GCGCTCGGCA AGGCCCTCGC CGAGGAGTTC GGCCCCCAAG GGGTGCGGGT CAACACCGTC
TCGCCCGGCC CGGTGCGCAC CGCCATGTGG GAGGACCCGG CCGGGTACGG CGCGGAGCTC
GCCAGGTCGA TGGGGATGGA GCACGAGCAG GTGCTGGCCC AGCTCCCGGC CTGGACGGGC
ATGACCATCG GCCGCTTCGT CGAGCCGGCC GAGGTGGCCG CCATGGTCGT CCACCTCGCC
TCCCCCCACG CCGCCGGCAT CACCGGCACC GACCACCTCG TCGACGGCGG ATCCGTCAAG
ACCGTCTGA
 
Protein sequence
MDMRLTGKTA VVTGASRGIG LAIVAALAAE GMRVVAGART ASPELKETGA TAVPVDLSTP 
DGPALLVAEA LAELGEIDLL VNNVGGGDGG EGQLGGFLGF DDEGWRQAFD LNFLSAVRTT
RAALPSLLRS RGSIVNISSN GARLPHAGPV AYTTAKAALT ALGKALAEEF GPQGVRVNTV
SPGPVRTAMW EDPAGYGAEL ARSMGMEHEQ VLAQLPAWTG MTIGRFVEPA EVAAMVVHLA
SPHAAGITGT DHLVDGGSVK TV