Gene Sros_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1979 
Symbol 
ID8665261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2126398 
End bp2127657 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type branched-chain amino acid transport systems periplasmic component-like protein 
Protein accessionYP_003337710 
Protein GI271963514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGGC AGGCAGTGCG ACTCATCGGC CTGGTGAGCG CGGCGGCGCT CGTCGCCGGC 
TGCGCGGCCG CACAGAAGAA CGGCACGGGC GCCCCCGGCG AGGCCGCGGG GGCCGCCGGG
GTGACCGGTA CGACGGTCAC CGTGGGCGGC GTGCTCACCA AGACCAGCGC GAGCGGCTAC
TCGACCAAGG ACGCCGAGAT CGGGGCCAGG GCCCGGTTCC AGCGGGCGAA CGAGGCAGGC
GGCGTGCACG GCCGCAGGAT CGAGTTCGCC GGGGCGGAGG ACGACAACCA GGACGCCGCC
AAGGGGGACG CGGCGGCCAA GAAACTGGTC CAGAGGGACA AGGTCTTCGC GCTGGTGCCG
GTACACGCGC CCAACTTCGG CGGCGCGACC TTCCTGGAGC AGCAGGGCGT GCCGTGGTTC
GGCTGGGCGA CGGGCCCGCA GTGGTGCGGT ACGGAGACCG GCTTCGGCTA CAACGGCTGC
CTCGCCCCCA AGCCGGGCGC GGGCTCGCAG ACCTGGTGGG GCAACCAGAT GGCCGAGCTG
ATCGGCGGGT CCGCGGGCAA GAGCGTCTAC GTCCAGACGA CCGACTCCAG CGGCAGCAAG
TACGGCGGCA AGACCATCTC CCAGTCCTTC CAGGCGGCGG GCTTCACGCT GGCGGGCCTC
AACTCCGGGC TGCCCGCCGC CGCCCCGCCG CCGGACTGGC TGCCCTACGT CAACAAGATC
ATGACCTCGG ACGGCGGCGA GGCCCCGGAC CTGGTGGTCT CGATCATCGC CGGCACCAAG
TTCAACACCG GCCTGTACGC CGCGCTGAAG AAGGCCGGAT ACAAGGGCCT GCTGTCCGAC
GCGACCAGCT ACGACGCGGC CATCCTCAAG GACCCGGCCA CCGCCCGGGC ACTCGAAGGC
GTGATCGCGG CCCCCATGTT CGAGCCCTTC GAGTCCCAGG CCCCGGAGAT CGCCCAGCTC
AAGGCGGACG TGGAGAAGGC GGCGCCGGGC ACCGCGCTGA CCCAGCACCT GGCCATCGGC
TACTGGGCCG CGGACATCTT CCTCAAGGTG CTGGAACAGA CGGGCAGGGA CCTGACCAGG
GAGAGGTTCC TGGCCACCGC CAACGGCTCG TTCACCTACG AGAACGCCGG ATTCGGCAGG
ATCCAGTACC CCAAGGACCA CACCGAACCC AACGGCTGCG GCGCCCTGGT CAAGCTTGAG
GGCGGCGCGT TCAAGGTCGC CAAGAACATG AAGTGCTTCG ACAACGTCCC GCTGAAATAG
 
Protein sequence
MRRQAVRLIG LVSAAALVAG CAAAQKNGTG APGEAAGAAG VTGTTVTVGG VLTKTSASGY 
STKDAEIGAR ARFQRANEAG GVHGRRIEFA GAEDDNQDAA KGDAAAKKLV QRDKVFALVP
VHAPNFGGAT FLEQQGVPWF GWATGPQWCG TETGFGYNGC LAPKPGAGSQ TWWGNQMAEL
IGGSAGKSVY VQTTDSSGSK YGGKTISQSF QAAGFTLAGL NSGLPAAAPP PDWLPYVNKI
MTSDGGEAPD LVVSIIAGTK FNTGLYAALK KAGYKGLLSD ATSYDAAILK DPATARALEG
VIAAPMFEPF ESQAPEIAQL KADVEKAAPG TALTQHLAIG YWAADIFLKV LEQTGRDLTR
ERFLATANGS FTYENAGFGR IQYPKDHTEP NGCGALVKLE GGAFKVAKNM KCFDNVPLK