Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1979 |
Symbol | |
ID | 8665261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 2126398 |
End bp | 2127657 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
Protein accession | YP_003337710 |
Protein GI | 271963514 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACGGC AGGCAGTGCG ACTCATCGGC CTGGTGAGCG CGGCGGCGCT CGTCGCCGGC TGCGCGGCCG CACAGAAGAA CGGCACGGGC GCCCCCGGCG AGGCCGCGGG GGCCGCCGGG GTGACCGGTA CGACGGTCAC CGTGGGCGGC GTGCTCACCA AGACCAGCGC GAGCGGCTAC TCGACCAAGG ACGCCGAGAT CGGGGCCAGG GCCCGGTTCC AGCGGGCGAA CGAGGCAGGC GGCGTGCACG GCCGCAGGAT CGAGTTCGCC GGGGCGGAGG ACGACAACCA GGACGCCGCC AAGGGGGACG CGGCGGCCAA GAAACTGGTC CAGAGGGACA AGGTCTTCGC GCTGGTGCCG GTACACGCGC CCAACTTCGG CGGCGCGACC TTCCTGGAGC AGCAGGGCGT GCCGTGGTTC GGCTGGGCGA CGGGCCCGCA GTGGTGCGGT ACGGAGACCG GCTTCGGCTA CAACGGCTGC CTCGCCCCCA AGCCGGGCGC GGGCTCGCAG ACCTGGTGGG GCAACCAGAT GGCCGAGCTG ATCGGCGGGT CCGCGGGCAA GAGCGTCTAC GTCCAGACGA CCGACTCCAG CGGCAGCAAG TACGGCGGCA AGACCATCTC CCAGTCCTTC CAGGCGGCGG GCTTCACGCT GGCGGGCCTC AACTCCGGGC TGCCCGCCGC CGCCCCGCCG CCGGACTGGC TGCCCTACGT CAACAAGATC ATGACCTCGG ACGGCGGCGA GGCCCCGGAC CTGGTGGTCT CGATCATCGC CGGCACCAAG TTCAACACCG GCCTGTACGC CGCGCTGAAG AAGGCCGGAT ACAAGGGCCT GCTGTCCGAC GCGACCAGCT ACGACGCGGC CATCCTCAAG GACCCGGCCA CCGCCCGGGC ACTCGAAGGC GTGATCGCGG CCCCCATGTT CGAGCCCTTC GAGTCCCAGG CCCCGGAGAT CGCCCAGCTC AAGGCGGACG TGGAGAAGGC GGCGCCGGGC ACCGCGCTGA CCCAGCACCT GGCCATCGGC TACTGGGCCG CGGACATCTT CCTCAAGGTG CTGGAACAGA CGGGCAGGGA CCTGACCAGG GAGAGGTTCC TGGCCACCGC CAACGGCTCG TTCACCTACG AGAACGCCGG ATTCGGCAGG ATCCAGTACC CCAAGGACCA CACCGAACCC AACGGCTGCG GCGCCCTGGT CAAGCTTGAG GGCGGCGCGT TCAAGGTCGC CAAGAACATG AAGTGCTTCG ACAACGTCCC GCTGAAATAG
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Protein sequence | MRRQAVRLIG LVSAAALVAG CAAAQKNGTG APGEAAGAAG VTGTTVTVGG VLTKTSASGY STKDAEIGAR ARFQRANEAG GVHGRRIEFA GAEDDNQDAA KGDAAAKKLV QRDKVFALVP VHAPNFGGAT FLEQQGVPWF GWATGPQWCG TETGFGYNGC LAPKPGAGSQ TWWGNQMAEL IGGSAGKSVY VQTTDSSGSK YGGKTISQSF QAAGFTLAGL NSGLPAAAPP PDWLPYVNKI MTSDGGEAPD LVVSIIAGTK FNTGLYAALK KAGYKGLLSD ATSYDAAILK DPATARALEG VIAAPMFEPF ESQAPEIAQL KADVEKAAPG TALTQHLAIG YWAADIFLKV LEQTGRDLTR ERFLATANGS FTYENAGFGR IQYPKDHTEP NGCGALVKLE GGAFKVAKNM KCFDNVPLK
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