| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1943 |
|---|
| Symbol | |
|---|
| ID | 8665225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2078627 |
|---|
| End bp | 2083033 |
|---|
| Gene Length | 4407 bp |
|---|
| Protein Length | 1468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | GAF sensor hybrid histidine kinase |
|---|
| Protein accession | YP_003337674 |
|---|
| Protein GI | 271963478 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTGACG GCGACTTCGG CACGCGCCTG CCCGACGACG GCGACGGGCT GCTCAAGGAG
ATCGCCACCG TGTTCAACGG CATGGTGGAC CAGCTCTCCC TGTTCACCTC CGAGGTGACG
CGCGTGGCCC GCGAGGTGGG CACCGAGGGG CAGCTGGGCG GTCAGGCGGA CGTGCCCGGC
GTCTCCGGCA CGTGGAAGGA CCTGACGGAC TCGGTCAACG CCATGGCGGG CAACCTCACC
GACCAGGTCC GCGACATCGC GCAGGTCGCG ACCGCGGTGG CGACCGGCGA CCTGTCGCAG
AAGATCACCG TGGACGTCCG GGGCGAGATC CTGGAGCTGA AGAACACCCT CAACACGATG
GTGGACCAGC TGTCGTCCTT CGCCGACGAG GTCACGAGAG TGGCCCGCGA GGTGGGCACC
GAGGGCCGGC TGGGCGGCCA GGCCGAGGTG ACCGGGGTCG CCGGCACCTG GCGCGACCTC
ACCGACTCGG TGAACTTCAT GGCGGGCAAC CTCACCGACC AGGTCCGCTC CATCGCGCAG
GTCACCACCG CGGTGGCCAA GGGCGACCTG TCGCAGAAGA TCACCGTGGA CGCCCGGGGT
GAGATCCTGG AGCTGAAGAA CACCATCAAC ACGATGGTCG ACCAGCTGTC GTCCTTCGCC
GACGAGGTCA CCCGGGTCGC CCGCGAGGTG GGCACCGACG GCCGGCTCGG CGGCCAGGCC
GACGTCAAGG GCGTCTCCGG CACCTGGCGC GACCTCACCG ACTCGGTGAA CTACATGGCG
GGCAACCTCA CCGACCAGGT GCGGAACATC TCGCAGGTGG CCACGGCGGT CGCCCGCGGC
GACCTGTCGC AGAAGATCAC CGTCTCGGCC CGGGGTGAGA TCCTGGAGCT GAAGAACACC
CTCAACACGA TGGTGGACCA GCTGTCGTCC TTCGCCGACG AGGTCACGAG AGTGGCCCGC
GAGGTGGGCA CCGACGGCCG GCTGGGCGGC CAGGCCGACG TCAAGGGCGT CTCCGGCACC
TGGAAGGCGC TCACCGAGTC GGTGAACGTG ATGGCCGACA ACCTCACGGC CCAGGTCCGC
AGCATCGCGC AGGTCACCAC GGCGGTGGCC AAGGGCGACC TGTCGCAGAA GATCCGGGTG
GACGCGCGCG GGGAGATCAT GGAGCTGAAG GAGACCATCA ACACGATGGT CGACCAGCTC
TCGGCCTTCG CCGACGAGGT CACCCGGGTC GCCCGGGAGG TCGGCACCGA GGGCAACCTC
GGCGGCCAGG CCACCGTCCG CGGGGTGTCC GGCACGTGGA AGGACCTCAC CGACAACGTC
AACTCGATGG CCAACAACCT GACCAGCCAG GTGCGCTCCA TCGCGCAGGT CACCACGGCG
GTGGCCAAGG GCGACCTGTC GCAGAAGATC ACTGTCGAGG CCAAGGGTGA GGTCGCCGCG
CTCGCGCAGA CCATCAACAC CATGGTCGAC ACGCTGAGCG CGTTCGCCGA CGAGGTCACC
CGGGTCGCCC GGGAAGTGGG CACCGAGGGC GAGCTGGGCG GTCAGGCCCG CGTGCCCAAC
GTGGCCGGCA CGTGGAAGGA CCTCACCGAC AACGTCAACT CGATGGCCAA CAACCTGACC
AACCAGGTCC GCAACATCGC CCAGGTCACC ACCGCGGTCG CCCAGGGCGA CCTGACCAAG
AAGATCGACG TGGACGCCCG GGGCGAGATC CTGGAGCTGA AGACCACCAT CAACACGATG
GTGGACCAGC TGTCGTCCTT CGCCGCCGAG GTCACCCGGG TCGCCCGCGA AGTGGGCAGT
GAGGGGCGGC TCGGCGGCCA GGCCGAGGTC GAGGGGGTCT CCGGGACCTG GAAGCGGCTG
ACGGAGAACG TCAACGAGCT GGCCGGCAAC CTGACGCGCC AGGTCCGTGC GATCGCCGAG
GTGACCAGCG CGGTGACCTC GGGCGACCTC ACCCGGTCGA TCACGGTCGA CGCCTCCGGC
GAGGTGGCCG AGCTCAAGGA CAACATCAAC TCCATGGTGC AGTCCCTGCG TGAGACCACC
CTGGCCAACC AGGAGCAGGA CTGGCTCAAG TCCAACCTGG CCCGCATCTC CGGCCTGATG
CAGGGGCACC GCGACCTCGC CATCGTGGCC GAGCTGGTGA TGAACGAGCT GGCCCCGCTG
GTCTCGGCCC AGTACGGGAC ATTCCTGCTC GCGGAGGAGA TCTCGGAGGG CGCGGAGCTG
CGGGTGGTGG GCGGTTACGG TCACCGGGAG ACCGGCCGCT GCTACGGGTT CGGCGACTCG
CTCGTGGGAC AGGCCGCGCT GGCCAAGCGC CCCATCCTGG TCGAGGACAT CGCCGCCGGA
TACCTCACCA TCTCCTCCAG CCTGGGGGCG GCCGGTCCGG TCAATCTCAT CGTGCTGCCG
ATCATCGTCG AGGACCAGGT GCTCGGCGTG ATCGAGCTGG CCAGCCTCAA CCGCTTCACC
CAGGTGCACC GGGCCTTCCT GGAGCAGCTG GTGGAGACCA TCGGCGTCAA CGTCAACACG
ATCGTCGCCA ACGCCCGGAC CGACTCCCTC CTCACGGAGT CGCAGCGGCT CGCGATCGAG
CTGCAGGTCG GCCAGGAGGA GCTGCAGCGC TCCAACGCCG AGCTTGAGGA GAAGGCGGAG
CTGCTGGCCC GGCAGAACCG CGACATCGAG ACGAAGAACA GCGAGATCGA GCAGGCGAGG
CAGGAGCTGG AGGACCGGGC CAAGCAGCTC GCGCTGGCCT CCAAGTACAA GAGCGAGTTC
CTGGCCAACA TGAGCCACGA GCTGCGCACC CCGCTCAACT CGCTGCTGAT CCTCGCCCAG
CTGCTGGCCC AGAACCCGGC CCGCAACCTC ACCGCCAAGC AGGTGGAGTA CGCCAACGTC
ATCCACTCGG CCGGCACCGA CCTGCTCCAG CTGATCAACG ACATCCTCGA TCTGTCCAAG
ATCGAGGCGG GCAAGATGAA CATCAGCCTT GAGTCCCTGC CGCTACGGCA GCTCCTCGAC
TACGTCGAGG CGACCTTCCG CCCGCTGACC ACGGAGAAGG GCCTGCGCTT CGACGTCACC
GTGGCCTCCG ACGTCCCCGG CGAACTGCTC ATGGACGAGC AGCGGCTACG CCAGGTGCTG
CGGAACCTGC TGTCCAACGC GGTGAAGTTC ACCGAGACGG GTTCGGTCCA GCTCCGCATC
GAGCGGGCCG GGAGGATGGA GCTGCTGGGG GTCCCCGGGC AGGAGACCCT TGCCTTCCAC
GTCGTGGACA CCGGCATCGG CATCGCCGAG GAGAACCTCT CCCAGATCTT CGACGCCTTC
CAGCAGGCCG ACGGCACCAC CAGCCGCAAG TACGGCGGCA CCGGGCTGGG CCTGTCCATC
AGCCGCGAGA TAGCCGCGCT GTTCAATGGT GAGATCCGGG CGGTCAGCGC CCTGGGCGAG
GGCAGCACCT TCAGCCTCTG CCTGCCGATC GCGGACATCA CCCCGAGCGC CGTGGCCACG
GCGGCCGGCG GATCCGCGGC CGTCAGGCCC TCCGCGCAGG CCTCAGCGCG GCCGGGTACG
GCGCCCGAGC GGGCAGGCGG GGAGGGCCGT CGCCTGCTCG TCGTGGAGTC GCGGCCCAAC
GGGCTGCTCT CCCAGCTCGC CGAGAGCGTC GTCGCCGACC TGACCGGGAC GCACGGGCCG
GTCTGGGTCT CCACCGCCAA CGATCCGGTT ACCGCCCTGG AGAGCCTGAA CAGGGACGAC
TACCACTGCG TCGTGCTCGA TCTGGGCATG GGGCACGACG GGGCGGCGGA GTTCCTCCGG
GGGCTCGACG ACTATCCGGT CCTGCGCGAG CTCCCCGTCC TCGCCCATCA CACCCGTACG
CTCACCCGGC CCCAGGAGAA CCTGCTCAAG GGCCGCTCCA ACACCCAGCC CCTGGAGCTC
CTGCCCAGCC TCGACGAGCT GCGCGAACGC ATCACCCTGC ACCTGTCGGC CCAGGAGCCC
GGCCACGTGC TGCCGCTGGT CCAGCCCAGT CCCGACGAAC GGCCGCAGGC GCTGAACGAG
GCCGACACCA TGCTGGTGAA CCGCAAGGTC CTGGTCGTCG ACGACGACGT CCGCAACGTG
TTCGCGCTGA CCAACATCCT CGAACTCCAC GGCATGCAGG TGCTCTACGC GGAGAACGGC
CGCAAGGGCA TCGAGGTGCT GTCGCGCAAC GAGGACGTCG ACCTGGTCCT GATGGACATC
ATGATGCCGG AGATGGACGG CTACGCCGCC ACCGCCGCCA TCCGCAAGAT GCCGCGCTTC
GCCGACCTGC CGATCATCGC GGTGACCGCC AAGGCGATGC AGGGCGACCG TGACAAGACC
CTGGCCGCGG GGGCCAGTGA CTACGTCACC AAGCCGGTCG ACGCGCAGGA GCTGCTCTCC
CGCATCCAGC AGTGGATGGG GCTGTGA
|
|---|
| Protein sequence | MRDGDFGTRL PDDGDGLLKE IATVFNGMVD QLSLFTSEVT RVAREVGTEG QLGGQADVPG
VSGTWKDLTD SVNAMAGNLT DQVRDIAQVA TAVATGDLSQ KITVDVRGEI LELKNTLNTM
VDQLSSFADE VTRVAREVGT EGRLGGQAEV TGVAGTWRDL TDSVNFMAGN LTDQVRSIAQ
VTTAVAKGDL SQKITVDARG EILELKNTIN TMVDQLSSFA DEVTRVAREV GTDGRLGGQA
DVKGVSGTWR DLTDSVNYMA GNLTDQVRNI SQVATAVARG DLSQKITVSA RGEILELKNT
LNTMVDQLSS FADEVTRVAR EVGTDGRLGG QADVKGVSGT WKALTESVNV MADNLTAQVR
SIAQVTTAVA KGDLSQKIRV DARGEIMELK ETINTMVDQL SAFADEVTRV AREVGTEGNL
GGQATVRGVS GTWKDLTDNV NSMANNLTSQ VRSIAQVTTA VAKGDLSQKI TVEAKGEVAA
LAQTINTMVD TLSAFADEVT RVAREVGTEG ELGGQARVPN VAGTWKDLTD NVNSMANNLT
NQVRNIAQVT TAVAQGDLTK KIDVDARGEI LELKTTINTM VDQLSSFAAE VTRVAREVGS
EGRLGGQAEV EGVSGTWKRL TENVNELAGN LTRQVRAIAE VTSAVTSGDL TRSITVDASG
EVAELKDNIN SMVQSLRETT LANQEQDWLK SNLARISGLM QGHRDLAIVA ELVMNELAPL
VSAQYGTFLL AEEISEGAEL RVVGGYGHRE TGRCYGFGDS LVGQAALAKR PILVEDIAAG
YLTISSSLGA AGPVNLIVLP IIVEDQVLGV IELASLNRFT QVHRAFLEQL VETIGVNVNT
IVANARTDSL LTESQRLAIE LQVGQEELQR SNAELEEKAE LLARQNRDIE TKNSEIEQAR
QELEDRAKQL ALASKYKSEF LANMSHELRT PLNSLLILAQ LLAQNPARNL TAKQVEYANV
IHSAGTDLLQ LINDILDLSK IEAGKMNISL ESLPLRQLLD YVEATFRPLT TEKGLRFDVT
VASDVPGELL MDEQRLRQVL RNLLSNAVKF TETGSVQLRI ERAGRMELLG VPGQETLAFH
VVDTGIGIAE ENLSQIFDAF QQADGTTSRK YGGTGLGLSI SREIAALFNG EIRAVSALGE
GSTFSLCLPI ADITPSAVAT AAGGSAAVRP SAQASARPGT APERAGGEGR RLLVVESRPN
GLLSQLAESV VADLTGTHGP VWVSTANDPV TALESLNRDD YHCVVLDLGM GHDGAAEFLR
GLDDYPVLRE LPVLAHHTRT LTRPQENLLK GRSNTQPLEL LPSLDELRER ITLHLSAQEP
GHVLPLVQPS PDERPQALNE ADTMLVNRKV LVVDDDVRNV FALTNILELH GMQVLYAENG
RKGIEVLSRN EDVDLVLMDI MMPEMDGYAA TAAIRKMPRF ADLPIIAVTA KAMQGDRDKT
LAAGASDYVT KPVDAQELLS RIQQWMGL
|
|---|
| |