| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1919 |
|---|
| Symbol | |
|---|
| ID | 8665197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 2043738 |
|---|
| End bp | 2045780 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Chitinase-like protein |
|---|
| Protein accession | YP_003337650 |
|---|
| Protein GI | 271963454 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATC GATTGAATCT CAGAAAACTT GCGGCGGCAG CCGTACTGGT GCTGAGCGGG
ACGATGCTGG CCGCGTCGCC CGCCCACGCC GCCAACATCG CGACGAACCC CGGATTCGAG
AGCGACCTGA CCGGCTGGAC GTGTTCGGCG TCGGCGGGTG CCACGGCGGT GTCGTCGCCG
GTGCACGGCG GTTCGAAGGC GCTGCAGGCC ACGCCGGCCG GCAGTGACAC CGCGCGCTGC
CAGCAGACCG TCAGCGTCAA GCCGTCCTCG TCCTACTCGC TGTCGGCGTG GGTGCGGGGC
GGCTACGTCT TCCTGGGCGT GCTCGGCACC GGCACGACCG ACCAGAGCAC GTGGACCTCC
TCGCCGTCGG CCTACGCGCA GCTCTCCAGG ACCTTCACCA CCGGCCCCTC GACCACCTCG
GTGACGATCT ACGTCAACAG CTGGTACGGC CAGGGCGCCT ACCAGGCCGA CGACTTCGTG
CTCGACGGCG AGGCCGGACA GGGGCAGCCC CCGGCCGCGC CGGCCGGCCT GACCAGCGCG
AGCACGCGCA CCAGCGCCGT GCTGAACTGG ACCGCCTCCG CCGGCGCGAC CGGCTACAAC
GTCTACCGCG ACGGCGCCAA GGTCGCCACG GCCACCGGGA CCACCTACAC CGAGACCCCG
CCGCAGGGCA ACTACACCTA CCAGGTGAGC GCCGTCAACG CGGCGGGCGA GTCGCCCAGG
TCCAACCAGG TCTCGGTGGT GATCGGCAAC GACACCCCGC CGCCCCCGGC CGTCCCGACC
GGCCTGACCG CCACGGTCGG CGGCGCGAAC GTGGCGCTGA GCTGGAACGC CTCCTCGAAC
GCGACCGGCT ACAACGTCTA CCGCGACGGC GTCAAGGTGG GCTCGCCGAC CACCACCGCC
TACACCGACA CCCCCGCCGC GGGCACGCAC ACCTACCAGG TGAGCGCCGT CAACCCGACC
GGCGAGTCGG CCAGGTCCGG TCCGGTCTCC GCCACGGTCG GCGGCGACCA GTCGGGCAGC
CTGCCCAAGC GGGTGCTGGT CGGCTACCTG CACGCCTCCT TCGCCAACGG CTCCGGCTAC
ATCCGGATGG CCGACGTGCC GAACGAGTGG AACGTCATCA ACCTCGCCTT CGGCGAGCCG
ACCTCGGTGA CCTCCGGCGA CATCCGCTTC CAGCAGTGCC CGGTCGCCGA GTGCCCCGGC
GTCGAGCCGG AGGCCGACTT CATCGCGGGG ATCCGGGCCA AGCAGGCGCT CGGCAAGAAG
GTGCTGATCT CGATCGGCGG CCAGAACGGC CAGGTCCAGC TCACCACCGC GGCCGCGCGC
GACAAGTTCG TCCAGTCGGT GAGCGCCATC ATCGACAGGT ACGGCCTCGA CGGCCTCGAC
ATCGACTTCG AGGGCCACTC GCTCTACCTC AACCAGGGCG ACACCAACCT CGCCGCCCCG
ACCACCCCGG TCATCGTCAA CCTGATCTCC GCGCTGAAGA CCCTCAAGGC CAGGTACGGC
GCCAAGTTCG TGCTGACCAT GGCACCGGAG ACCTTCTTCG TCCAGCTCGG CTACCAGTTC
TACGGCCCCG GCGCGAACGG CTCGGCCGAC CAGCGGGCCG GGTCCTACCT CCCCGTCATC
CACGCGATGC GCAACGACCT GACCCTGCTC CACGTCCAGG ACTACAACTC CGGGCCGATC
ACCGGGCTGG ACAACCAGTA CCACACCATG GGCACCCACG ACTTCCACGT GGCCATGACG
GACATGCTGC TGGCGGGCTT CCCGATCGCG GGGAACCCGA ACAACGTCTT CCCCGCCCTG
CGCCCGGAGC AGGTCGCCAT CGGCCTGCCC GCCGCGGCCT ACGCGGGCAA CGGCTTCACC
ACGGTGGCCG AGGTCCAGAA GGCCTTCGAC TGCCTGGCGA AGGGGACCAA CTGCGGGCCG
TACAAGCCGC GCGGCGTCTA CCCGAACCTG CGCGGCCTGA TGACCTGGTC GATCAACTGG
GACAAGTACA ACTCCTTCGA GTTCTCCCGT AACCACCGGG CCTACCTCAA CGGCCTGGGC
TGA
|
|---|
| Protein sequence | MNHRLNLRKL AAAAVLVLSG TMLAASPAHA ANIATNPGFE SDLTGWTCSA SAGATAVSSP
VHGGSKALQA TPAGSDTARC QQTVSVKPSS SYSLSAWVRG GYVFLGVLGT GTTDQSTWTS
SPSAYAQLSR TFTTGPSTTS VTIYVNSWYG QGAYQADDFV LDGEAGQGQP PAAPAGLTSA
STRTSAVLNW TASAGATGYN VYRDGAKVAT ATGTTYTETP PQGNYTYQVS AVNAAGESPR
SNQVSVVIGN DTPPPPAVPT GLTATVGGAN VALSWNASSN ATGYNVYRDG VKVGSPTTTA
YTDTPAAGTH TYQVSAVNPT GESARSGPVS ATVGGDQSGS LPKRVLVGYL HASFANGSGY
IRMADVPNEW NVINLAFGEP TSVTSGDIRF QQCPVAECPG VEPEADFIAG IRAKQALGKK
VLISIGGQNG QVQLTTAAAR DKFVQSVSAI IDRYGLDGLD IDFEGHSLYL NQGDTNLAAP
TTPVIVNLIS ALKTLKARYG AKFVLTMAPE TFFVQLGYQF YGPGANGSAD QRAGSYLPVI
HAMRNDLTLL HVQDYNSGPI TGLDNQYHTM GTHDFHVAMT DMLLAGFPIA GNPNNVFPAL
RPEQVAIGLP AAAYAGNGFT TVAEVQKAFD CLAKGTNCGP YKPRGVYPNL RGLMTWSINW
DKYNSFEFSR NHRAYLNGLG
|
|---|
| |