Gene Sros_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1893 
Symbol 
ID8665171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2014479 
End bp2015786 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content69% 
IMG OID 
ProductHNH endonuclease domain protein 
Protein accessionYP_003337624 
Protein GI271963428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0279315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGTCC TCGACAAGCA CGGCCAACCG CTACAGCCCA CGAGCCCGGC CTACGCGCGC 
AAACTCCTGC GCTCAGGCCG GGCTGTGGTG CACCGTCACA CCCCGTTCGT CATCCGTCTC
AAGGACCGCA CCGCCGCCGA CTCCACCGTC GAAGGCATGC ACGTCGGCAT AGACCCCGGC
AGCAAGCACA CCGGCATTGC CGTGTTCACC GAGCACGGCG GGAGCCGTAC CGGCAGGTAC
GCGCTCCAGC TCGACCACCG AGGCGCAGCG ATCCGCGACA AGCTCGCCTC GCGGGCCGCG
CTGCGCCGGG GACGTAGGTC CCGGAACCTG CGCTACCGCG CGCCCCGATT CAACAACCGC
ACCAAACCCA AGGGGTGGCT CGCGCCGTCC CTGAAACACC GTATGGACAC CACCATGTCG
TGGGCGGACC GCCTGAGGCG CTGGGCACCC GTCAGCGCCG TGCATGTGGA GCGGGTCGCG
TTCGACACGC ACGCCCTGTC GGCCGGTAGG CCGCTTGAAG GAGCGGCCTA CCAGCAGGGC
ACCCTCGTCG GGTACGAGGT GCGCGAATAC CTACTGGCCA AATGGGGCCG GGCGTGCGCG
TACTGCGGAA TCTCCAGGAC GCCGCTGAAC ATCGACCACA TCCATCCGCG CTCCCGAGGT
GGCTGCGATC GGATCAGCAA CCTGACCGTG GCCTGCATCC CGTGCAACCA GACCAAGAAC
GCCACCCCCG TGGAGGAGTT CCTCAAAGCC AAGCCCACCC TGCTGGCGAA GATCCTCAAG
CAGGCCAAGG CTCCGCTGCG CGACGCCGCC GCCGTCAACG CCACCCGGTG GGCACTGTGG
CGGGCGCTGG AGGCGACCGG CCTGCCGGTC GCGACGGCGT CGGGCGCACG CACCAAGTGG
AACCGGTCTC GCACCGGCGC CGCCAAGTCG CACGCGTTGG ACGCGCTGCA CGTCGGCCAC
CTGGAGACCG TGGCCGGCTG GCCGTCCACG GTCCTGGTGG TCACGGCGAC CGGACGCGGT
AGCTACGCCC GCACCACGCC CGACCGATAC GGGTTCCCCC GCCTCGTCCG GCCACGGATC
AAATTGCACC ACGGCTTCCA AACCGGCGGC CTGGTCCGGG CGAACGTCCC GGCAGGCAAG
AAAGCCGGGG TTCACCTCGG GCGAGTCCTG GTCCGGTCCT CCGGCTCGTT CGACATCACT
ACCCGGCACG GTCGCGTCGC CGGGATCAGC CACAGGCATG TCCGTCATCT TCAGCGCGCG
GACGGCTACG GCTACACGAC TCGGAAAGAA GCTGATCGAA ATGACTGA
 
Protein sequence
MFVLDKHGQP LQPTSPAYAR KLLRSGRAVV HRHTPFVIRL KDRTAADSTV EGMHVGIDPG 
SKHTGIAVFT EHGGSRTGRY ALQLDHRGAA IRDKLASRAA LRRGRRSRNL RYRAPRFNNR
TKPKGWLAPS LKHRMDTTMS WADRLRRWAP VSAVHVERVA FDTHALSAGR PLEGAAYQQG
TLVGYEVREY LLAKWGRACA YCGISRTPLN IDHIHPRSRG GCDRISNLTV ACIPCNQTKN
ATPVEEFLKA KPTLLAKILK QAKAPLRDAA AVNATRWALW RALEATGLPV ATASGARTKW
NRSRTGAAKS HALDALHVGH LETVAGWPST VLVVTATGRG SYARTTPDRY GFPRLVRPRI
KLHHGFQTGG LVRANVPAGK KAGVHLGRVL VRSSGSFDIT TRHGRVAGIS HRHVRHLQRA
DGYGYTTRKE ADRND