Gene Sros_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1883 
Symbol 
ID8665161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp2000981 
End bp2001832 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID 
Productpolyamine ABC transporter, permease protein 
Protein accessionYP_003337614 
Protein GI271963418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCC TCGCCCCCTA CCTGCTCATC CTGCCGGGCG GACTCTGGCT GGCGATCTTC 
CTGGTGGTGC CGATGGTCTT CATGGCCTCG GTCTCCACCC AGGAGGGCGA CGTGGTGAAC
GGGTTCGTCC AGACGTTCAA CTTCTCGGTG TACGGCGACG CCCTGGTCCA GTACCAGACG
CAGTTCCTGC GGTCGGCCGG CTACGGCCTG GCCGCGACGG TCGTCTCCGT CGCGCTGGCC
TACCCGATGG CCTACTGGAT CGCCTTCAAG GGCGGCCCCC GCAAGTCCAC CTACCTGCTG
CTGGTGCTGC TGCCGTTCTT CGTCTCGTTC GTGCTGCGCA CGGTGTCGTG GAAGTTCCTG
CTGGCCGACG ACGGCATGCT GCTGTCCCCG CTGAAGTCGA TGGGCCTGGT GCCCGGTGAC
TTCCACGTGC TGCAGACGAC GGTGGCGGTG ATCGGCGGCC TGGTCTACAA CTACCTGCCG
TTCATGATCC TGCCGATCTA CGTGGCCCTG GAGCGGGTGG ACCCCCGGGT GGTCGAGGCC
GCCCAGGACC TGTACGCGGC CAGGCGCGAG GCGTTCACCA AGGTCGTGCT GCCGCTCTCG
CTGCCGGGCG TGTTCGCCGG GGTGCTGATG ACGTTCGTCC CGATGACGGC CGACTACGTC
AACGCCGGCA TCCTCGGTGG CCCGGAGAAC ACGATGATCG GCAACATCAT CCAGACCGAG
TATCTCGTCA ACAACGACTA CCCGACCGCC GCCGCGCTGT CGTTCACGCT GATGGCGGCG
ATGCTGGTCG GCATCTTCGC CTACGCCAAG GCGCTCGGCA CCGAGAACGT GCTGGAGGCG
GCGGCCCGAT GA
 
Protein sequence
MKRLAPYLLI LPGGLWLAIF LVVPMVFMAS VSTQEGDVVN GFVQTFNFSV YGDALVQYQT 
QFLRSAGYGL AATVVSVALA YPMAYWIAFK GGPRKSTYLL LVLLPFFVSF VLRTVSWKFL
LADDGMLLSP LKSMGLVPGD FHVLQTTVAV IGGLVYNYLP FMILPIYVAL ERVDPRVVEA
AQDLYAARRE AFTKVVLPLS LPGVFAGVLM TFVPMTADYV NAGILGGPEN TMIGNIIQTE
YLVNNDYPTA AALSFTLMAA MLVGIFAYAK ALGTENVLEA AAR