| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1880 |
|---|
| Symbol | |
|---|
| ID | 8665158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 1997095 |
|---|
| End bp | 1998552 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | gamma-aminobutyraldehyde dehydrogenase |
|---|
| Protein accession | YP_003337611 |
|---|
| Protein GI | 271963415 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCACCC CGGTTGAGAA CCATGAGCCC ACCCGTCTGC GCAACTACAT CAATGGTGAG
TTCGTGGACG CCAAGAGCGG CCGATTCTCC GATGTCATCG ACCCCTGCAC CGGAGAGGCC
TACCTTCAGG CGCCGATCTC CGGTCCGGAG GACGTCGACG AAGCCTACGC CGCCGCAGCC
GCCGCCTTCG AGTCGTGGAG TCAGCTCACC CCGGGTGAGC GGGCCAACCT GCTGCTCAAG
GTGGCCGACG CCGTCGACGC CCGCGCCGAG GAGCTGAACG AGGCCGAGTG CCTCAACACC
GGCAAGCCGC GTGCCCGCAT GGCCGAGGAC GAGACTCCGG TGGCCGCCGA CCACTTCCGC
TTCTTCGCGG GCGCGGCGCG CACCCTGGAG GGCCCGACGT CGGGCGAGTT CCTCGCCGAC
CACACCTCCG TCATCCGGCA CGAGCCGATC GGCGTCGTGG GCCAGGTCAC GCCCTGGAAC
TACCCGATGA TGATGGCGGT CTGGAAGATC GCCCCCGCGC TCGCCGCGGG CAACACCATC
GTGCTCAAGC CCTCCGACAC CACCCCGGTC TCCACGGTCA AGCTGGCCGA GATCCTCGGG
GAGATCCTGC CGAAGGGCGT CTTCAACGTC GTCGTCGGCG ACCGCGAGAC CGGCGCCCTC
GTCGTCGGCC ACCCGACCGC GCAGATGGTC GCGATCACCG GTTCGGTCGG TGCGGGCATG
GCCGTGGCCA AGTCCGCGGC CGAGGACCTC AAGCGGGTCC ACCTGGAGCT CGGCGGCAAG
GCCCCCGTCG TCGTCTTCGA CGACGTCAAG GACCTCAAGG CCGCCGCCGA GGCCATCGCC
ACGGCCGGTC TCTACAACGG CGGCCAGGAC TGCACCGCGG CCTGCCGCGT GCTGGTCCAC
GAGGACGTCC ACGACGAGTT CGTGGCCGCG CTCACCGAGG CGGCCGCGGG CACCGTGACC
GGCGACCTGT CCAACGAGGA CGCCCTCTAC GGCCCGCTCA ACAACGCCGG CCAGCTCGCC
CGCGTCGCGG CCTTCTTCGA CCGGGTCCCC GGCCACGCCA AGGTCCTGAC CGGCGGTCAC
CAGGTCGGCG ACAAGGGCTA CTTCTTCGCT CCCACCATCG TCGACGGCCT CCAGCAGGAC
GACGAGATGG TGCAGAACGA GGTCTTCGGG CCCGTCATCA CCGTCCAGAC CTTCTCCGAC
GAGGCCGACG CGGTGGCCAA GGCCAACGGC GTCAGGTACG GCCTGTCGAG CTCGGTGTGG
ACCTCCGACC ACGGCCGGGC CATGCGGATG TCGAAGCGTC TCGACTTTGG CGTCGTATGG
GTCAACACTC ATATCCCGTT TGTCTCAGAG ATGCCTCACG GTGGCTTCAA GCACTCCGGA
TACGGCAAGG ACCTTTCCGT CTTCGGGTTG CACGATTACC TCCGCGTTAA GCATGTAATG
CACTACATCG GCGAATAG
|
|---|
| Protein sequence | MTTPVENHEP TRLRNYINGE FVDAKSGRFS DVIDPCTGEA YLQAPISGPE DVDEAYAAAA
AAFESWSQLT PGERANLLLK VADAVDARAE ELNEAECLNT GKPRARMAED ETPVAADHFR
FFAGAARTLE GPTSGEFLAD HTSVIRHEPI GVVGQVTPWN YPMMMAVWKI APALAAGNTI
VLKPSDTTPV STVKLAEILG EILPKGVFNV VVGDRETGAL VVGHPTAQMV AITGSVGAGM
AVAKSAAEDL KRVHLELGGK APVVVFDDVK DLKAAAEAIA TAGLYNGGQD CTAACRVLVH
EDVHDEFVAA LTEAAAGTVT GDLSNEDALY GPLNNAGQLA RVAAFFDRVP GHAKVLTGGH
QVGDKGYFFA PTIVDGLQQD DEMVQNEVFG PVITVQTFSD EADAVAKANG VRYGLSSSVW
TSDHGRAMRM SKRLDFGVVW VNTHIPFVSE MPHGGFKHSG YGKDLSVFGL HDYLRVKHVM
HYIGE
|
|---|
| |