Gene Sros_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1870 
Symbol 
ID8665148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1986799 
End bp1988085 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content73% 
IMG OID 
ProductAspartate--tRNA ligase 
Protein accessionYP_003337601 
Protein GI271963405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.465433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATC GAGTCCTCGC CGCCGACCTG CCCCGGCACG TCGGCCGCCA TGTCCGTCTT 
GCCGGTTGGC TGCATCGCCG CCGCGACCTG AAGTCCGTCT CCTTCCTCGT GATCCGTGAC
CGCTCCGGCC TCGCCCAGGT CGTGCTCGGC CAGCCCGTGC CGTACCCCGA GGAGACGGTC
CTGCAGATCA GTGGCACCGT GGTCGCGAAC CCGCAGGCCC CGGGCGGCGC CGAGCTGACC
GGTCCGACGA TCGAGGTGCT GGCCGAGGCG GTGGAGCCGC CGCCGTTCGA CCTCTACCGG
CCCACGGTCC CGGCGACGCT GCCGACGGTC CTCGACCACG CCCCGGTCGC GCTCCGCCAT
CCCCGGCTAC GGGCGCCCTT CGAGATCGCC GCGGCCGGCG TCGCCGGGTT CCGCGCCGCA
CTGGACGGGC TCGGGTTCGT CGAGAGCCAG ACTCCGAAGA TCGTCGGCAC CGCCACCGAG
TCGGGGGCCA ACGTGTTCGG CATCGACTAC TTCGGCCGTC CCGCCTTCCT CGCCCAGTCG
CCGCAGTTCT TCAAGCAGGC GCTGGTCGGG GTCTTCGAGC GGGTCTACGA GGTGGGACCG
GTCTTCCGGG CCGAGCCGCA CGACACCGCC CGGCATCTGG CGCAGTACAC CAGCCTGGAC
GCCGAGCTGG GATTCGTCCG CGACCACCGC GACGTGATGG CGGTGCTGCG GGAGGCCCTG
GCGGGCATGC ACGCGGCGGC GGCCGAGCGG GCCACCGGGG CCCTGGAACT GCTGGGGATC
GAACCGCCCG AGGTCCCCGG GGAGATCCCG GCGATCCACT TCGCCGACGC GCAGGAACTG
CTGGCCCGGC ACACCGGTGA GGACCCGCGA GGGGAGCCCG ACCTCGCCCC CGCGCACGAG
CGCTGGCTGG GTGAGTGGGC GTTGCGCGAG CACGGCTCGG AGTTCCTGTT CGTCACCGGT
TACCCGATGG TCAAACGCCC CTTCTACACG CACCCGGACC CGGAACGACC GGAGTTCTCG
CGGAGCTTCG ACCTGCTCTT CCGGGGGCTG GAGCTGGTCA CCGGCGGGCA GCGGCTGCAC
CGGCACGCCG ACTACCTCGC GGCGCTGGCC GTCCGGGGCG AGGACCCGCA GGCGTATGCG
GGCTATCTGG CCGCCTTCGC CCACGGCATG CCTCCGCACG GTGGCTTCGC GATCGGCCTG
GAGCGCTGGA CCTCACGGTT GACGGGGGCC GCCAACATCA GGCAGACCAC GCTGTTCCCC
CGGGACCTGC ACCGCCTGAC GCCGTAG
 
Protein sequence
MIHRVLAADL PRHVGRHVRL AGWLHRRRDL KSVSFLVIRD RSGLAQVVLG QPVPYPEETV 
LQISGTVVAN PQAPGGAELT GPTIEVLAEA VEPPPFDLYR PTVPATLPTV LDHAPVALRH
PRLRAPFEIA AAGVAGFRAA LDGLGFVESQ TPKIVGTATE SGANVFGIDY FGRPAFLAQS
PQFFKQALVG VFERVYEVGP VFRAEPHDTA RHLAQYTSLD AELGFVRDHR DVMAVLREAL
AGMHAAAAER ATGALELLGI EPPEVPGEIP AIHFADAQEL LARHTGEDPR GEPDLAPAHE
RWLGEWALRE HGSEFLFVTG YPMVKRPFYT HPDPERPEFS RSFDLLFRGL ELVTGGQRLH
RHADYLAALA VRGEDPQAYA GYLAAFAHGM PPHGGFAIGL ERWTSRLTGA ANIRQTTLFP
RDLHRLTP