Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1870 |
Symbol | |
ID | 8665148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1986799 |
End bp | 1988085 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Aspartate--tRNA ligase |
Protein accession | YP_003337601 |
Protein GI | 271963405 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.465433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATC GAGTCCTCGC CGCCGACCTG CCCCGGCACG TCGGCCGCCA TGTCCGTCTT GCCGGTTGGC TGCATCGCCG CCGCGACCTG AAGTCCGTCT CCTTCCTCGT GATCCGTGAC CGCTCCGGCC TCGCCCAGGT CGTGCTCGGC CAGCCCGTGC CGTACCCCGA GGAGACGGTC CTGCAGATCA GTGGCACCGT GGTCGCGAAC CCGCAGGCCC CGGGCGGCGC CGAGCTGACC GGTCCGACGA TCGAGGTGCT GGCCGAGGCG GTGGAGCCGC CGCCGTTCGA CCTCTACCGG CCCACGGTCC CGGCGACGCT GCCGACGGTC CTCGACCACG CCCCGGTCGC GCTCCGCCAT CCCCGGCTAC GGGCGCCCTT CGAGATCGCC GCGGCCGGCG TCGCCGGGTT CCGCGCCGCA CTGGACGGGC TCGGGTTCGT CGAGAGCCAG ACTCCGAAGA TCGTCGGCAC CGCCACCGAG TCGGGGGCCA ACGTGTTCGG CATCGACTAC TTCGGCCGTC CCGCCTTCCT CGCCCAGTCG CCGCAGTTCT TCAAGCAGGC GCTGGTCGGG GTCTTCGAGC GGGTCTACGA GGTGGGACCG GTCTTCCGGG CCGAGCCGCA CGACACCGCC CGGCATCTGG CGCAGTACAC CAGCCTGGAC GCCGAGCTGG GATTCGTCCG CGACCACCGC GACGTGATGG CGGTGCTGCG GGAGGCCCTG GCGGGCATGC ACGCGGCGGC GGCCGAGCGG GCCACCGGGG CCCTGGAACT GCTGGGGATC GAACCGCCCG AGGTCCCCGG GGAGATCCCG GCGATCCACT TCGCCGACGC GCAGGAACTG CTGGCCCGGC ACACCGGTGA GGACCCGCGA GGGGAGCCCG ACCTCGCCCC CGCGCACGAG CGCTGGCTGG GTGAGTGGGC GTTGCGCGAG CACGGCTCGG AGTTCCTGTT CGTCACCGGT TACCCGATGG TCAAACGCCC CTTCTACACG CACCCGGACC CGGAACGACC GGAGTTCTCG CGGAGCTTCG ACCTGCTCTT CCGGGGGCTG GAGCTGGTCA CCGGCGGGCA GCGGCTGCAC CGGCACGCCG ACTACCTCGC GGCGCTGGCC GTCCGGGGCG AGGACCCGCA GGCGTATGCG GGCTATCTGG CCGCCTTCGC CCACGGCATG CCTCCGCACG GTGGCTTCGC GATCGGCCTG GAGCGCTGGA CCTCACGGTT GACGGGGGCC GCCAACATCA GGCAGACCAC GCTGTTCCCC CGGGACCTGC ACCGCCTGAC GCCGTAG
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Protein sequence | MIHRVLAADL PRHVGRHVRL AGWLHRRRDL KSVSFLVIRD RSGLAQVVLG QPVPYPEETV LQISGTVVAN PQAPGGAELT GPTIEVLAEA VEPPPFDLYR PTVPATLPTV LDHAPVALRH PRLRAPFEIA AAGVAGFRAA LDGLGFVESQ TPKIVGTATE SGANVFGIDY FGRPAFLAQS PQFFKQALVG VFERVYEVGP VFRAEPHDTA RHLAQYTSLD AELGFVRDHR DVMAVLREAL AGMHAAAAER ATGALELLGI EPPEVPGEIP AIHFADAQEL LARHTGEDPR GEPDLAPAHE RWLGEWALRE HGSEFLFVTG YPMVKRPFYT HPDPERPEFS RSFDLLFRGL ELVTGGQRLH RHADYLAALA VRGEDPQAYA GYLAAFAHGM PPHGGFAIGL ERWTSRLTGA ANIRQTTLFP RDLHRLTP
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