Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1829 |
Symbol | |
ID | 8665107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1952401 |
End bp | 1952916 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | 16S rRNA processing protein RimM |
Protein accession | YP_003337561 |
Protein GI | 271963365 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0875871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCTTG TCATAGGCCG GATCGGCCGC CCGCACGGAC TCCGCGGCGA CGTGTCCGTG GAGGTGCGCA CCGACGATCC GGAGCGGCGT TTCGCCCCCG GGACGGCCGT CGCCACCGAC CCCGCGTCGG CCGGTCCGCT CGTCATCGAG TCCCGGCGCT GGCACTCCGG GGTCCTGCTG GTCAGGTTCG AGGGCGTCAA CGACCGCAAC CGTGCCGAGG ACCTCCGCGG CACCACGCTC GTCATCGACT CGGCGGACAT CCCGCCCTCC GACGACCCCG ACGAGTTCTA CGACCACCAG CTCATCGGCC TCGCCGTGCT CACCCCCGAC GGCGAGCGGG TCGGGGAGGT CTCCGACGTC CTCCACCACG GTCAGGACCT GCTCGTCGTA CGGCGGGGCG GCGCCGAGGT CTACGTGCCG TTCGTGAAGG CGCTGGTCCC CGTGGTCGAC CTGGACAAGG GCGTCCTCGT CGTGGACGGG CCCGCCGGCC TGCTCGACCC GGACGAGATC GTCTGA
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Protein sequence | MQLVIGRIGR PHGLRGDVSV EVRTDDPERR FAPGTAVATD PASAGPLVIE SRRWHSGVLL VRFEGVNDRN RAEDLRGTTL VIDSADIPPS DDPDEFYDHQ LIGLAVLTPD GERVGEVSDV LHHGQDLLVV RRGGAEVYVP FVKALVPVVD LDKGVLVVDG PAGLLDPDEI V
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