Gene Sros_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1829 
Symbol 
ID8665107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1952401 
End bp1952916 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content72% 
IMG OID 
Product16S rRNA processing protein RimM 
Protein accessionYP_003337561 
Protein GI271963365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0875871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCTTG TCATAGGCCG GATCGGCCGC CCGCACGGAC TCCGCGGCGA CGTGTCCGTG 
GAGGTGCGCA CCGACGATCC GGAGCGGCGT TTCGCCCCCG GGACGGCCGT CGCCACCGAC
CCCGCGTCGG CCGGTCCGCT CGTCATCGAG TCCCGGCGCT GGCACTCCGG GGTCCTGCTG
GTCAGGTTCG AGGGCGTCAA CGACCGCAAC CGTGCCGAGG ACCTCCGCGG CACCACGCTC
GTCATCGACT CGGCGGACAT CCCGCCCTCC GACGACCCCG ACGAGTTCTA CGACCACCAG
CTCATCGGCC TCGCCGTGCT CACCCCCGAC GGCGAGCGGG TCGGGGAGGT CTCCGACGTC
CTCCACCACG GTCAGGACCT GCTCGTCGTA CGGCGGGGCG GCGCCGAGGT CTACGTGCCG
TTCGTGAAGG CGCTGGTCCC CGTGGTCGAC CTGGACAAGG GCGTCCTCGT CGTGGACGGG
CCCGCCGGCC TGCTCGACCC GGACGAGATC GTCTGA
 
Protein sequence
MQLVIGRIGR PHGLRGDVSV EVRTDDPERR FAPGTAVATD PASAGPLVIE SRRWHSGVLL 
VRFEGVNDRN RAEDLRGTTL VIDSADIPPS DDPDEFYDHQ LIGLAVLTPD GERVGEVSDV
LHHGQDLLVV RRGGAEVYVP FVKALVPVVD LDKGVLVVDG PAGLLDPDEI V