Gene Sros_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1804 
Symbol 
ID8665082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1926414 
End bp1927997 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-type spermidine/putrescine transport systems ATPase components-like protein 
Protein accessionYP_003337537 
Protein GI271963341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGA TCACAGGTGT CAGCCGCCGG TTCGGCGACG TCACGGCGCT GTCGGAGGTC 
TCCCTGGAGA TCCGGCAGGG GGAGTTCTTC GCGCTGCTGG GCCCCAGCGG CTGCGGCAAG
ACCACCCTTC TGCGGATCCT GGCCGGGTTC GAGGCCCCCG ACTCGGGCAC CGTCACGCTC
GACGGTGAGG ACCTGCTCGG CCAGGCGGCG CACCGCCGCC CGGTCAACCT CATGTTCCAG
TCCTACGCGC TGTTCCCGCA CATGACCGTG GCGAAGAACG TCGCCTACGG CCTGGAGCGG
GAGAAGCTGC CCAGGGCCGA GATCCGTGAG CGGGTCGAGG AGGTTCTGGA GAAGGTCGGC
CTGGCCGCGA TGGCCAAGCG CAAGCCGCAG CAGCTCTCCG GCGGCCAGCG CCAGCGCGTC
GCGCTGGCCC GCGCGATCGT GAAGCGGCCG CGCCTGCTGC TGCTGGACGA GCCGCTGTCC
GCGCTGGACA AGAAGGTGCG CGCGGAGATG CAGCTGGAGC TCAAGCGCCT CCAGAACGAG
GTCGGCATCA CCTTCGTCGT GGTCACCCAC GACCAGGAGG AGGCCATGTC GCTGGCCGAC
CGGATCGCGG TCTTCAGCGC GGGCAAGGTG GAGCAGGTGG ACGCGCCGGT GACGCTGTAC
GAGCGGCCGC GCACGCCGTT CGTGGCCGAC TTCGTGGGCG CCAACAACCT CTTCGAGGGC
ACGGCGTGCG CGGACGGTCT GTCCAGCGAC GGCCTCGGCG TCCTGCCCTG CCTGTCCGAC
CTGGAGGAGG GCACGTCCGC GCTGCTCGCC GTACGGCCGG AGCGGCTGAG ACTGATCAGC
CTCGGCCACG CGCCGGCGGA GGCGGAGAGC GCGGTGACCG CCGGTGAGGA CGTCGCGGAC
GCCGAGGTCG AGACGGCCGG CGAGGACGCC GAGGGTTCCG AGAGCGTGTC AGCCGACGAG
GACACCAAGG ACACCGAGGA CGTGGCCGCC GACGAGGGCG CCGAGGATTC CGAGCGTCCC
GAGAGCACCG AGGCCACCGA GGACACCAAG GACGTGGCCG CCGACGAGGG CGCCGAGGGT
TCCGAGGGTT CCGAGAGCGT GTCAGCCGCC GGGGACGCCG AGAGCGCTGT GGCCGGCGAG
GATGCCGAGG ACGCCGAGGA CGTGTCAGCC GACGAGGACA CCGAGGACGC CGATAGCGTG
TCAGCCGCGG AGGACGCGGT GGACGCTGAG GCAGTGACGG CCGACGAGAG TGCCGAGGGC
GCCGGGGCCG GCGAGGACGT CGAGAGCGGC GCTGCGGCCG GCGAGGACGC CGAGGATGTG
GCGGGCGCCG AGGACGCCGG GGACACCGGG AGCGTGGTGG ACGGCGGCGC CGTGGAAGCC
GTGGATCCGG TGGCCGGGGA GGGCGTGCTG CGGGGAGAGG TCGCCGACGT CAGCTTCTAC
GGAGGCATCT CGCACATCTC CGTCCTCGTG GCCGGACGCC CGGTGCCGGT CCTGGTGGCC
ACGCAAGGTG CCACCCAGGT CCAGGCGGGA TCCTCGGTCG CCCTCACCTG GGCGCCCGAG
GACGGGGTGC TGATCCCTCA ATGA
 
Protein sequence
MLQITGVSRR FGDVTALSEV SLEIRQGEFF ALLGPSGCGK TTLLRILAGF EAPDSGTVTL 
DGEDLLGQAA HRRPVNLMFQ SYALFPHMTV AKNVAYGLER EKLPRAEIRE RVEEVLEKVG
LAAMAKRKPQ QLSGGQRQRV ALARAIVKRP RLLLLDEPLS ALDKKVRAEM QLELKRLQNE
VGITFVVVTH DQEEAMSLAD RIAVFSAGKV EQVDAPVTLY ERPRTPFVAD FVGANNLFEG
TACADGLSSD GLGVLPCLSD LEEGTSALLA VRPERLRLIS LGHAPAEAES AVTAGEDVAD
AEVETAGEDA EGSESVSADE DTKDTEDVAA DEGAEDSERP ESTEATEDTK DVAADEGAEG
SEGSESVSAA GDAESAVAGE DAEDAEDVSA DEDTEDADSV SAAEDAVDAE AVTADESAEG
AGAGEDVESG AAAGEDAEDV AGAEDAGDTG SVVDGGAVEA VDPVAGEGVL RGEVADVSFY
GGISHISVLV AGRPVPVLVA TQGATQVQAG SSVALTWAPE DGVLIPQ