Gene Sros_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1803 
Symbol 
ID8665081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1925641 
End bp1926414 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID 
Productspermidine/putrescine ABC transporter, permease protein 
Protein accessionYP_003337536 
Protein GI271963340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTAAAC CACGCCTGCT GTACGTCCCC TTCTGGGCGA CCTACGTATT CCTGTACACA 
CCCATCGTGG TGCTCGTCGT CATGTCGTTC AACGCCGGCA AGTCGCCCTA CTCCTTCGAC
GGCCTCAGCC TGAAGTGGTA CGACAAGCTG GCCGGCAACG CCACCGTCGC GGAGGGCCTG
GTCAACACGC TGATCGTGGC CGCCGGATCC ACGGTGCTGG CCACGGTGCT CGGCACCCTG
CTGGCGGTGG GCCTGGCCCG CCACACCAAG TCGCGGCTGC TGGACGGGCT CGGCGTGCTG
CCGGCCGTAC TGCCGGACCT GGTGCTGGCC ATCGGCCTGC TGGTGTTCTA CGCCATGATC
AAGATGACCC TCGGCCTGCA CTCGGTGCTG CTGGCGCACA CGGTGTTCGG CATGGCCTTC
GTGACCGCGG TGGTCCGCAC CCGGCTCACC CACAGCGACA CCTCCCTGGA GGAGGCGTCC
AGGGACCTCG GCGCGACCCC GCTCACCACG TTCGTCCGCG TCACGCTGCC CCAGCTCATG
CCGGGCATCG CGGCGGGCGC CATGCTGGCG TTCACGCTCT CCATCGACGA GTTCGTGATC
GCCTTCTTCA CGGCGGCCCC GACCACGCCC ACCCTGCCCA TCGTCATTTA CTCAATGGTC
CGCTTCGGGG TCACCCCGGA GATCAACGCG CTGGCGACAC TGCTGCTGGC CGTGAGCTTC
ACCGTGGTGA TCGTGGCCCA GCGGATGACC CGACTGACGG AGTCGCTGTC CTAA
 
Protein sequence
MRKPRLLYVP FWATYVFLYT PIVVLVVMSF NAGKSPYSFD GLSLKWYDKL AGNATVAEGL 
VNTLIVAAGS TVLATVLGTL LAVGLARHTK SRLLDGLGVL PAVLPDLVLA IGLLVFYAMI
KMTLGLHSVL LAHTVFGMAF VTAVVRTRLT HSDTSLEEAS RDLGATPLTT FVRVTLPQLM
PGIAAGAMLA FTLSIDEFVI AFFTAAPTTP TLPIVIYSMV RFGVTPEINA LATLLLAVSF
TVVIVAQRMT RLTESLS