Gene Sros_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1762 
Symbol 
ID8665040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1879844 
End bp1880623 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003337496 
Protein GI271963300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.56784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00686542 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGAGATC TGTTACGGCA AAGAATCGTG GACACAGGGC GGCTGCCGCT GTTCTGTTTC 
TTCGTCGCGC TGATCGGCGC CTTCGTGTTC ACCCGGATCA ACGTCCGGCT CATCCGGGCC
AAGATCGGCT GGTTCCGCAA CGTCAATGTC GGTGAGATGC ACATCCACCA CGTGGTGTTC
GGCGTGGTGC TGACCATGCT CGGCGGGGTG TCGGGGCTGA TCGTGTCGGG CATCTCGCAG
ACCTGGTACG CGGTGACGGC GGCCGTCTTC GGCATCGGCG CCGCCCTGAT CCTGGACGAG
TTCGCGCTGA TCCTGCACCT GCACGACGTC TACTGGGAGG CGGAGGGCCG CACGTCGGTC
GACGCGGTGT TCATCGCGAT CGCGATCACC GGCCTGCTCC TGCTCGGCCT GCGCCCGCTC
GGCTGGGAAC GCTCCGACGG CACGCCGCAG GGGACGTGGC TCACTGCCGG GGTCATCGTG
CTCAACCTCG CGCTCGCGGT GGTCACCCTG CTCAAGGGGA AGATCTGGAC CGGCCTGGCG
GGTCTGTTCA TCCCGATCCT GCTGATCCCC GGCGCCCTGC GGCTGGCCCG CCCGGGATCG
CCCTGGGCCC ACTGGTTCAT GGCGCCTGGC GCCCGGCGGC CCCGGCCCCG CCAGATGGCC
AGGGCCGAGC GCCGCGAGGA GCGCTGGCGC CGCCCGGTGA TCCGCGCCAA GATCGCCTTC
CAGGAGTTCG TCTCCGGACG CCACGACCTG CCCTCCACCC GGCGCAGGAT CCGGCGGTGA
 
Protein sequence
MGDLLRQRIV DTGRLPLFCF FVALIGAFVF TRINVRLIRA KIGWFRNVNV GEMHIHHVVF 
GVVLTMLGGV SGLIVSGISQ TWYAVTAAVF GIGAALILDE FALILHLHDV YWEAEGRTSV
DAVFIAIAIT GLLLLGLRPL GWERSDGTPQ GTWLTAGVIV LNLALAVVTL LKGKIWTGLA
GLFIPILLIP GALRLARPGS PWAHWFMAPG ARRPRPRQMA RAERREERWR RPVIRAKIAF
QEFVSGRHDL PSTRRRIRR