Gene Sros_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1761 
Symbol 
ID8665039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1879112 
End bp1879831 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content73% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_003337495 
Protein GI271963299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.86506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0126946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGAGT CGCCGCGACT GACGACCGTG CTTCGGCCGG TGCGTGCGGG GAACGCGTTC 
GAGGAGACCG TGGAACGCCT GCTCCAGGCG ATCAAACTCG GGGTGGTGAC CGAGAAGCTG
CCGCCGGAGC GGGAGCTGGC GGTGCAGCTC GGGATCAGCA GGGTCACCCT GCGCGAGGCC
ATCCGCGCGC TGCAGGAGGC GGGCTACCTC ACCGTGCGGC GCGGCAGGTA CGGCGGCGCC
TTCGTCACCT ACGCCCCGCC CCGCCCCGGC CAGGGAGACC TGCGCAGGGC CGTGGCCGAC
ATGGGCGACG ACGACCTGGC CGACGCGCTC ACCTTCCGGA TGGCCGTGGA GTGCGGCGCC
GCCCAGGTGC TGGCCACCGC GGAGCTGAGC GGGGCGCGGC GCGACGCGCT GCGGCAGCGC
CTGCGCGAGG TCAACTCGGC CGGGCCCGAC GACTACCGCC GCCTCGACAC GGCCTTCCAC
CTGGCCATCG CCGAGCTGAC CGGCTCCCCG CTGCTCGCCG CGACCTGCGC CGACGCCAGA
CTCCGGGTCA CCGACCTGCT CAACGCGATC CCCGTCCTTC AGCGCAACAT CGAGCACGCC
GCCGCCCAGC ACGAGGCGAT CGTCACGGCC ATCCTGGCCG GGGACCCCGA GGCCGCGCGG
CGGGCGGTCG CCGAACATCT TGAGGGGACA GCAGCCTTGC TGCGAGGGTT TCTCGCATAA
 
Protein sequence
MDESPRLTTV LRPVRAGNAF EETVERLLQA IKLGVVTEKL PPERELAVQL GISRVTLREA 
IRALQEAGYL TVRRGRYGGA FVTYAPPRPG QGDLRRAVAD MGDDDLADAL TFRMAVECGA
AQVLATAELS GARRDALRQR LREVNSAGPD DYRRLDTAFH LAIAELTGSP LLAATCADAR
LRVTDLLNAI PVLQRNIEHA AAQHEAIVTA ILAGDPEAAR RAVAEHLEGT AALLRGFLA