Gene Sros_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1679 
Symbol 
ID8664956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1794246 
End bp1795526 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content73% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003337413 
Protein GI271963217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.484765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.594324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAA AAGCTGACGG AAGAGTGGCG GGGCGCTTCA GGCGCTCCGT CCTCCACGTG 
TTCCCCCGGC GCAGGAAGCG CACGACCTTC GAGCGGCTCC GCCGGTTGAC CATCTGGTCG
CTGACCACCG GTCCGCTCCT GGTCTGGTTC GGTGCCCTCG GCGGGATCGC CGAGGAGTTC
AGTGTCCCCG GCGGGATCGC CGAGCACGCG GGGGCGGACC TGCTCGTCCT CATCCTCGGG
CTGCTGGGGC TGGCCGCCTT CAGCGTCCTC TACATGAGGA TGGTGAAGGC TGCCATCGCG
GGGACCTCGG CCAACCGCGA GATCGTGGCC TCGGCCGTGC TCGCGGTCGT CCTGCTGCTG
ACCCAGGAGA CCCAGCTGTG GACCTGGGGG CTGGTCGCCC CGGCCTGGGC GGCGGGCGCG
GCGCTGCTGC TGAGCAGGAT GGGCACGTTC GTCGCCGGTC TCGGCGCCGC CGTGGTCGCA
CTGCTTCTCA CACCGGTCGA TGACGGCTCC GGCTCCATCA TCGGACGCGT GCTGGCCGCA
CCACACCCGG GCGAGGACAC GGCCCCCCTC GCCGGCGCCC TCGCGGGCGC CTTCGTCGGG
GTCGCCCTGT CGCTGCCCTG CGCGAACCGG TTGCAGCTCT GGTTCTGGGA GGTCGTCAGG
CTGGCGGAGG AGGGCAAGGA GGCCCAGGCC CGGCTGGCCG TCACCGAGGA GCGGCTCCGC
TTCTCGCGCG ACCTGCACGA CCTGGTCGGG CACAGCCTGT CCGCGATCGC GGTCAAGAGC
GAGGTGGCCG CCAAGCTGTC GAAGGTGGAC ACCGAGCGGG CCGCCGGCGA GATGGAGGAG
GTCCGGGGAC TGGCCCGGGA GGCGCTGAAG GAGATCCGAG CGGCGGTGCG CGGCTACCGG
ACGGTCGATC TCGACGCCGA GCTGCGCAGC ATGACCGCGG TGCTGGAGGC CGACGGCATC
CGCTGCACGC TGGAGACGCC TCAGGAGCCG GTGCCCGAGG AGCTGGGCAC GCTGCTGGCC
TGGGTGGTCC GCGAGGGCAC CACCAACGTG CTGCGGCACA GCTCGGCGAC CCGGTGCCGG
ATCACGATCA CCCTCCGCGG CGGCGTGGCC GTGCTGGAGA TGGTCAACGA CGGCGTGACC
GGGCTGGACG GGCGCGGCGG CACCGGCCTC ATCGGGCTGT CGGAGCGGGT GGCCGCCATG
GGGGGTGCCG TCGCCGCCGG CGCCGGCGGC GCGGGAGAGT TCAGGTTGCG GGCGACGGTC
CCGCTGGAGG GGGTCAGATG A
 
Protein sequence
MSIKADGRVA GRFRRSVLHV FPRRRKRTTF ERLRRLTIWS LTTGPLLVWF GALGGIAEEF 
SVPGGIAEHA GADLLVLILG LLGLAAFSVL YMRMVKAAIA GTSANREIVA SAVLAVVLLL
TQETQLWTWG LVAPAWAAGA ALLLSRMGTF VAGLGAAVVA LLLTPVDDGS GSIIGRVLAA
PHPGEDTAPL AGALAGAFVG VALSLPCANR LQLWFWEVVR LAEEGKEAQA RLAVTEERLR
FSRDLHDLVG HSLSAIAVKS EVAAKLSKVD TERAAGEMEE VRGLAREALK EIRAAVRGYR
TVDLDAELRS MTAVLEADGI RCTLETPQEP VPEELGTLLA WVVREGTTNV LRHSSATRCR
ITITLRGGVA VLEMVNDGVT GLDGRGGTGL IGLSERVAAM GGAVAAGAGG AGEFRLRATV
PLEGVR