| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_1648 |
|---|
| Symbol | |
|---|
| ID | 8664925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 1761107 |
|---|
| End bp | 1762723 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | glycosyltransferase-like protein |
|---|
| Protein accession | YP_003337382 |
|---|
| Protein GI | 271963186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.323978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATG GAGCGGGGAC CGACCTGCCC CTGATCCGGC ACAACGACTA CTCCCCCCTG
GTCCCTCCCG CCCTCGGCGA ATGGGATCCG GCGCTCCCGG TAAGCGTGAT CATCCCCGCG
CACGGCGGCC AGCACAGGCT CGACCTGACC CTCGCCGCCC TGGCGGCGCA GACCTACCCC
GGTCACCTCA TGGAAGTGAT CGTGGTGGAC GACGGCAGCG ACCCGCCCCT GCGGCTGCCG
GAGATCGCTC CGCCGGGCAC CAGGATCGTC GCCGCCGACC CCGGGCGCTG GGGCATCGCG
CACGCGGTGA ACACCGGGGC CGCCCTCGCC GAGGGCCGGA TCATCCAGCG CCTGGACGCC
GACATGGTCG TCTGCCGCGA GCACATCGAG GCACTGGCCC GCTGGCACCA CCTGGCCGGC
TACCTGGTCG CCATCGGCGC GAAGAAGTTC GTCGAGGAGC CCGAGCTCTC CCCGGCCCAC
CTGTACGACG GCGTGCGCAC GGGCCCGCTG GAGGCCGTCT TCGACCTGTC GGAGGCGCTG
CCCAGCTCCA CCGAGCAGAC CATCTCCCGG ACCGACGGCC TGCGGACCAG CCGCAACCCC
TACCACGTGT GCACCGGGCC GACGGTGTCG ATGCGGCGGG AGACCTTCCA CGCCGTCGGC
GGGATCGATC CCGACGTGCT CAGGGGCGAG GACACCGAGT TCGCCTACCG GCTGGCCGCG
CACGGGGCGG TCTTCGTCCC CGACATGGCC GCCCAAGCCG TGCACCTGGG ACTTCCCGCG
CAGCGCCGTG ACCGTGACCG GGCGGTCCGC GCGGTCGGCC CCTACCTCGC CCACCGCGTT
CCGCTCCGCC GTGACCTGCG CAAGGACCGG GGCCGGCGGT GGCTGGTGCC GTACGTGGAG
GTGGTGCTCC ACGTCGACGG CGACGAAAGG CAGGTGCGCG ACGCGGTGAG CGCGGCGCTG
GAGGGGTCGG TGACCGACGT GCGGGTCACC CTGGTCGCCC CCTGGTCCCG GCTGTCCCCG
GGCCGCCGCG CGGTGCTCGG CGACCCCTCC TTCGAGCTGC GGCTGCTGCG CGAGCACTTC
GCCCACGACG AGCGGGTACG GCGGGCCGAC GAGGTCTCCC CCACCCCCGC GCCGATCCCC
TTCCGCTACA CCGGCCCGAT CTCGGTCCCG CTGGGGCACG GCTCGCTGGA GCGGATGATC
GCCGCGCTCC AGGACGACCG GTCCGGCATG CTCGTCGTCG ACCTCGGCGA CGACGGTACG
GCGACGCTGG AGCGGACCGA GGCGCTGGGC CGGGCACTCC TGCTGGGCGC GGACGACGTC
CCCGCCTCGA TCAAGGCCAC CCACGGCGTG CGGCACGGCG ACCGGGCGGA GTTCTGGCCG
GTCCCGGCCG CTCCGGCCGC TCCCGCCCGG AAGCCCGCGG GGGCTTCCGC GGAGAAGGCG
GAGAAGTCCG CGCAGGCCGC GCCCGGGAGG CCCGCGCAGG CTCCCCCGGA GAAGCCGGCC
TGGAATCCGC CGGAACAGCC CACGGCGGCT CCGTCCCGCG GGGACCGGCC CCCGGCGCCC
GCGCGGAAGC CGGAGTCCCG GCTCTCCAGG CTCCGTTCGG CGATCCGGAG GGGCTGA
|
|---|
| Protein sequence | MTDGAGTDLP LIRHNDYSPL VPPALGEWDP ALPVSVIIPA HGGQHRLDLT LAALAAQTYP
GHLMEVIVVD DGSDPPLRLP EIAPPGTRIV AADPGRWGIA HAVNTGAALA EGRIIQRLDA
DMVVCREHIE ALARWHHLAG YLVAIGAKKF VEEPELSPAH LYDGVRTGPL EAVFDLSEAL
PSSTEQTISR TDGLRTSRNP YHVCTGPTVS MRRETFHAVG GIDPDVLRGE DTEFAYRLAA
HGAVFVPDMA AQAVHLGLPA QRRDRDRAVR AVGPYLAHRV PLRRDLRKDR GRRWLVPYVE
VVLHVDGDER QVRDAVSAAL EGSVTDVRVT LVAPWSRLSP GRRAVLGDPS FELRLLREHF
AHDERVRRAD EVSPTPAPIP FRYTGPISVP LGHGSLERMI AALQDDRSGM LVVDLGDDGT
ATLERTEALG RALLLGADDV PASIKATHGV RHGDRAEFWP VPAAPAAPAR KPAGASAEKA
EKSAQAAPGR PAQAPPEKPA WNPPEQPTAA PSRGDRPPAP ARKPESRLSR LRSAIRRG
|
|---|
| |