Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1642 |
Symbol | |
ID | 8664919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 1753589 |
End bp | 1755289 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | cell wall biogenesis glycosyltransferase-like protein |
Protein accession | YP_003337376 |
Protein GI | 271963180 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGGGA CCGGTCTCAC CGCCACCGGC GGCCCCCTCC CGCAGGACGT CCCTCCGGCC CTCCACGAGG ACGAGCGGAC CGCCGTGCCC CGCGCCAGGA TCAGGCACAA CGACTACGGA CCGCTGCTCC CCCCCGCCCT GGGCGGCTGG GAACCGCGCC TGCGGGTGAG CGTGGTGATC CCGGCGCACG ACTGCCAGGA GGCCCTGGAC CGCACGCTCG CCGGGCTGGC CGCGCAGAGC TACCCCGCGC ATCTGACGGA GGTGGTCGTC GCCGACGACG GCAGCGACCC GCCGCTGCGG ATCCCCGCGA TCGCCCCGGC CAACACCCGG CTCGTCCGGG TGCCCGACGG CCGCTGGGGA CGGGGCTGGG CCCGCCAGAC CGGTGCGGCG GCGGCGGCCG GCGACATCCT GCACTGGGTC GACTCCGACA TGATCCTCGA CCGGGAGCAC ATCGAGGCGC ACATGCGCTG GCACCACCTC GCCTCCTACG CCGTCGTGCT CGGCGACGTC CGCTTCACCC CCGAAGGGGC CGGGCCCGGC GCGCGGGAGG TCTTCGCGGC GGTGGAGGCC GGAGACGCGG AGAGGCTGTT CGACGGGTCG GTCCCGCACG CGTGGCGGGC GGGCGTGCTC GACGAGACGC GGTGGCTGCG GGACGCGGGC GCCACCGCCT ACCGGCTCCA CTCGGGGGCC ACCACGTCGG TCCCCATGGC GCTCCTGCGC TCGGTCGGCG GGGTCAACAC CGCGCTGCAC ATGGGCGAGG ACACCGATCT CGGCTTCCGT CTCGCCCAGG CGGGCGCGGT CTTCATCCCC GACCCCCAGG CGCGCGGCTG GCATCTCGGC CCCTCCACGG TCATGCTCCG GGAGAAGGAG GTGCACCGGC ACAACTGGTC GGTCCTGCCC GACCTCATCC CCGACCTGCG CTGGCTGCGC ACCCACCCGC GCAGGCACTG GCTGGTGCCG TACGTGCACG TCGTCGTCGA CGCCCGCGGC GCCTCCTACG AGGACGTCCG GGCGAGCGTG GACGCCGCGC TCGCGGGCAC CGTCGTCGAC GTCGCCGTCA CCGTGGTCGG GCCGTGGGCG GCGCTCACCG GCGGACGCCG CTCCTCCCTG GACGAGCCGC TGCTCGACCT GCGGCTGGTG CGCAACCTGT ACACCCACGA ACCGCGCGTC TCCTTCACCG AGGAGACGCC GCTCAGCTCG GCGCCCGCGC CGTTCCGCCT CACCTGCCCC GCCGGGTGGG CGCTCGGCGC GGACAGCCTG GCCGAGCTGC TGAAACTCGC CGAGAGCGAG GGGTACGGCC TGCTGAGCGC GGTGCTCGAC GAGGGCGGCG AGCCGGAGAC CGGGGTCAGC GTGGTCAGGC TCGAACGCAC CGCCGCCTTC GCCAGGGCGG CGCTGGTGGA GGACTCGGGC GACCTCGACG GCGCGGTGCA CGAGCTGTTC GGCTCGTTCT GGGTGAGCGC CGACGATTTC GGCGTCATGG CCGCCGGGGA GGCGGAGCCC GTCGCCGGGG ATCCCGCGAA GTGGCGGGCC GGCGCGGCCC GGTGGCGGCG CGAGGCGGAA CGCCTGGAGG CCGAGGCCGA GAGCCTCCGG ACCGAGACCG AGCGCCTGCG GGCGGAGGTC AGGGAGCTGG AGGACGGCCG GCAGCGCGGC CCCCTGCGAG AGATCATCGC GACGGCCATG CGGCAGGGGA AGGCCGGCTG A
|
Protein sequence | MSGTGLTATG GPLPQDVPPA LHEDERTAVP RARIRHNDYG PLLPPALGGW EPRLRVSVVI PAHDCQEALD RTLAGLAAQS YPAHLTEVVV ADDGSDPPLR IPAIAPANTR LVRVPDGRWG RGWARQTGAA AAAGDILHWV DSDMILDREH IEAHMRWHHL ASYAVVLGDV RFTPEGAGPG AREVFAAVEA GDAERLFDGS VPHAWRAGVL DETRWLRDAG ATAYRLHSGA TTSVPMALLR SVGGVNTALH MGEDTDLGFR LAQAGAVFIP DPQARGWHLG PSTVMLREKE VHRHNWSVLP DLIPDLRWLR THPRRHWLVP YVHVVVDARG ASYEDVRASV DAALAGTVVD VAVTVVGPWA ALTGGRRSSL DEPLLDLRLV RNLYTHEPRV SFTEETPLSS APAPFRLTCP AGWALGADSL AELLKLAESE GYGLLSAVLD EGGEPETGVS VVRLERTAAF ARAALVEDSG DLDGAVHELF GSFWVSADDF GVMAAGEAEP VAGDPAKWRA GAARWRREAE RLEAEAESLR TETERLRAEV RELEDGRQRG PLREIIATAM RQGKAG
|
| |