Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_1628 |
Symbol | |
ID | 8664905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 1735101 |
End bp | 1735853 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003337362 |
Protein GI | 271963166 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.175437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCCAC CCCCACCCCC CATCGTCAGC ACGGTCAACC TCGTGAAGAT CTACCAGAAC GGCGGCGTCC CCGTGCCCGC CGTCCGGGGG GTGGACCTTC AGGTCGAGGC GGGGCAGTTC GTCGCGGTCA TGGGGCCGTC AGGGTCGGGC AAGTCCACCC TGGTGCACAT GATCGGGGGC CTGGACGCCC GGACCAGCGG CGAGATCTGG CTGGACGGCA GGCGGGCCGA CACGCTGAGC GAGAGCGCCT GGGCGCTGCT GCGCCGGCAG AAGATCGGCT TCGTCTTCCA GTTCTTCAAC CTGGTCGCCA ACATGACCGT GGCCGACAAC GTCGAGCTGC CCGCGCTGCT GGCCGGGTCC TCCCCGCGCG AGGCCCGCGA GCGGCGCGAG TATCTCCTCG GGGAGCTCGG GCTGGCCGAC CGCGCCGACT CCGCCCCCTC CCAGCTCGCG GGCGGCGAGC AGCAGCGGGT CGCCCTGGCC CGCGCGCTGG CCAACAGGCC GAGCCTGCTG CTCGCCGACG AGCCCACCGG CAACCTCGAC AGCCGCAACA CCCGTGACGT GCTCCGCCTT CTCAGCGAGG TCCACCGTGA CGGCCAGACC ATCATCATGG TCACCCATGA CGCCCGGGTG GCCAGCCTGG CCGACCGCGT GGTCTCCCTG CTCGACGGCG AGATCGTCGA CGACGGGACC GTCGGCCCGG CCCGCCGGCG GCCCAGGGCC ACCGCGGGCG ACGTCGTCGA GCTGAGGGGG TAG
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Protein sequence | MSPPPPPIVS TVNLVKIYQN GGVPVPAVRG VDLQVEAGQF VAVMGPSGSG KSTLVHMIGG LDARTSGEIW LDGRRADTLS ESAWALLRRQ KIGFVFQFFN LVANMTVADN VELPALLAGS SPREARERRE YLLGELGLAD RADSAPSQLA GGEQQRVALA RALANRPSLL LADEPTGNLD SRNTRDVLRL LSEVHRDGQT IIMVTHDARV ASLADRVVSL LDGEIVDDGT VGPARRRPRA TAGDVVELRG
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